Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8188g00005 ATGAGTTTTGGGGGGTTTCTTGAGAACAAACAAAGCGGTGGAGGTGGTAGGATTGTAGCAGATATTCCTTACAGCAACGGTTCTAACCACAGCGACAGTGATATAATGCCCTCTGGTGCAATCTCGCAGCCTCGTTTAGCCACTCCCACTTTGGCCAAATCCATGTTCAACTCTCCTGGCCTTTCTCTTGCACTTCAAAGTGATATAGATGGACAAGGGGATGTGAACCGGTTAATGCCCGAGAATTTTGAACAGAATGGTTTGAGAAGGAACCGGGAAGAGGAGCATGAAAGCAGATCTGGCAGTGATAACATGGATGGCGCTTCTGGTGATGATTTTGATGCTGCCGACAACCCACCAAGAAAAAAACGCTATCACCGACACACTCCTCAGCAAATTCAAGAGCTTGAATCGCTCTTCAAGGAGTGTCCTCATCCGGATGAGAAGCAAAGGCTTGAACTCAGCAGAAGGCTTAATTTGGAAACAAGGCAAGTGAAGTTTTGGTTCCAAAATCGAAGAACACAAATGAAGACACAACTGGAACGCCATGAGAACTCTTTGCTGAGGCAAGAGAATGACAAGCTTAGAGCGGAGAACATGTCCATGAGGGAAGCTATGAGGAATCCAATTTGCACAAACTGTGGAGGTCCTGCAATGATTGGTGAGATTTCACTAGAAGAACAGCATCTCAGGATTGATAACGCTAGATTGAAGGACGAACTAGACCGTGTTTGTGCTCTCGCTGGCAAGTTTTTGGGTCGCCCCATTTCGTCTTTGACAAGCTCAATTGGGCCTCCATTGCCAAACTCAAGTTTAGAGCTTGGGGTTGGGAGCAATGGTTTTGGAGGCTTGAACACTGTGCCTTCAACATTGCCTGATTTTGGGGTGGGAATATCAAGCCCCTTAGCCATGGTGTCACCTTCATCTAGACCAACAACAGCAACTGTGGTCAGTACTCCTGGCTTTGACAGATCAGTGGAGAGGTCTATTGTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTGGTGAAAATGGCTCAGACTGGGGAACCTCTTTGGATCAGGAGTTTGGAAGGGGGAAGGGAAATTCTCAACCACGAGGAATACACAAGGACAATCACTCCTTGCATTGGCTTGAGACCCAATGGTTTTGTCTCTGAGGCCTCCAGACAAACTGGCATGGTCATCCTAAACAGCTTGGCCCTTGTTGAAACATTAATGGACTCAAATCGATGGTCAGAGATGTTCCCTTATATGATTGCAAGAACCTCCACCGCTGAAGTGATATCTAATGGAATAAATGGGACTAGAAATGGTGCCCTTCAACTAATGCATGCTGAACTCCAAGTTCTTTCGCCCTTGGTTCCTGTTCGTGAGGTCAATTTTCTACGCTTTTGCAAGCAGCACGCAGAGGGGTTATGGGCAGTGGTAGATGTGTCTATAGATAGCATCCGAGAAACTTCTGGTGCACCCACTTTTGTGAACTGTAGGAGGCTTCCTTCTGGTTGCGTGGTGCAAGACATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAACATGCAGAATACGACGAAAGCCAAGTCCACCAACTCTATAGACCCTTGTTGAGCTCAGGCATGGGGTTTGGTGCACAACGTTGGGTTGCCATCCTTCAACGTCAATGCGAGTGCCTAGCCATCCTTATGTCATCAGCAGTTCCCGCTAGAGAACATTCAGCGATAGGCACGGGTGGAAGGCGAAGCATGTTGAAGCTGGCGCAGCGTATGACGAACAATTTCTGCGCGGGTGTTTGCGCGTCGACGGTGCACAAGTGGAACAAGCTGAATGTGGGGAACGTGGGGGAAGACGTGAGGGTGATGACGAGGAAGAGCGTGGACGACCCCGGCGAGCCTCCGGGAATCGTGCTCAGCGCGGCCACCTCCGTTTGGCTACCCGTCTCCGCTCAAAGACTCTTCGACTTCCTCCGCGACGAGAGGCTTCGAAGCGAGTGGGACATCCTCTCCAATGGTGGTCCCATGCAAGAGATGGCTCACATTGCCAAGGGACAAGACCACGCTAACTGTGTCTCCCTCCTCCGAGCCAGTGCTATGAATGCGAACCAGAGTAGCATGTTGATTTTGCAGGAGACCTGCACGGACGCGTCCGGGTCGCTTGTGGTGTACGCGCCGGTGGACATCCCCGCCATGCACGTCGTGATGAACGGCGGCGACTCCGCTTACGTGGCGCTCCTGCCGTCGGGATTCGCCATCGTGCCCGACGGATCCGGCGGCGACGATCACGGCGGCGGCGCGTCGCAGCAGCGGGCTGGAGGGTGCCTCCTGACGGTGGCGTTTCAGATACTCGTGAACAGCCTCCCGACGGCGAAGCTCACGGTGGAGTCGGTGGAGACGGTGAACAACCTCATCTCGTGTACTGTGCAGAAGATAAAAGCAGCGCTTCACTGCGAGAGCTGA 2454 0.5147 MSFGGFLENKQSGGGGRIVADIPYSNGSNHSDSDIMPSGAISQPRLATPTLAKSMFNSPGLSLALQSDIDGQGDVNRLMPENFEQNGLRRNREEEHESRSGSDNMDGASGDDFDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSRRLNLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMREAMRNPICTNCGGPAMIGEISLEEQHLRIDNARLKDELDRVCALAGKFLGRPISSLTSSIGPPLPNSSLELGVGSNGFGGLNTVPSTLPDFGVGISSPLAMVSPSSRPTTATVVSTPGFDRSVERSIVLELALAAMDELVKMAQTGEPLWIRSLEGGREILNHEEYTRTITPCIGLRPNGFVSEASRQTGMVILNSLALVETLMDSNRWSEMFPYMIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDSIRETSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVAILQRQCECLAILMSSAVPAREHSAIGTGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNVGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSAQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHANCVSLLRASAMNANQSSMLILQETCTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGSGGDDHGGGASQQRAGGCLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8188g00005 817 MobiDBLite consensus disorder prediction 1 42 - -
Mupr8188g00005 817 MobiDBLite consensus disorder prediction 24 42 - -
Mupr8188g00005 817 FunFam Homeobox-leucine zipper protein HDG1 109 195 - -
Mupr8188g00005 817 SUPERFAMILY Bet v1-like 327 557 - -
Mupr8188g00005 817 SUPERFAMILY Bet v1-like 585 810 - -
Mupr8188g00005 817 SMART HOX_1 120 183 IPR001356 GO:0003677
Mupr8188g00005 817 FunFam Homeobox-leucine zipper protein GLABRA 2 333 556 - -
Mupr8188g00005 817 SUPERFAMILY Homeodomain-like 105 179 IPR009057 -
Mupr8188g00005 817 MobiDBLite consensus disorder prediction 86 102 - -
Mupr8188g00005 817 Pfam START domain 333 557 IPR002913 GO:0008289
Mupr8188g00005 817 MobiDBLite consensus disorder prediction 72 129 - -
Mupr8188g00005 817 ProSiteProfiles START domain profile. 324 560 IPR002913 GO:0008289
Mupr8188g00005 817 Coils Coil 173 208 - -
Mupr8188g00005 817 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Mupr8188g00005 817 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 118 814 IPR042160 -
Mupr8188g00005 817 CDD homeodomain 121 179 IPR001356 GO:0003677
Mupr8188g00005 817 Gene3D - 399 553 IPR023393 -
Mupr8188g00005 817 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
Mupr8188g00005 817 CDD START_ArGLABRA2_like 328 556 - -
Mupr8188g00005 817 Gene3D - 109 195 - -
Mupr8188g00005 817 Pfam Homeodomain 122 177 IPR001356 GO:0003677
Mupr8188g00005 817 SMART START_1 333 557 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8188g00005 Mupr-Chr8188 46241 51540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8188g00005 1 817 Homeobox Transcription Factor Family AT3G61150 65.036 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr8188g00005 START 2.4e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8188g00005 K09338 - gmx:100787537 1491.09