Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8188g00004 ATGGCAAAGTGTCACCGGAACAACGTCGGATCCATCGCTCTCCACCACCGCCACTCTGTCAAAAATGCCACCGCCGGCGGCCACTTCCGCGTACTGCGGCGCATGATCTTTGACGCAGTCAGCTGCGGCGGCACTTCACGGTACCGGTATCGCCAGCGTGGCGGCGACGACGGCGATGACGAAGACTTCAGCTCGGCGGCGAGCCACACAGAGAAGGAGGAGAAGTCGGAGAAGCTATCGGATCTGCTGAACGCAGCGGAGAGCAAAACGGAGGCAGAGGCGAAGAAGAAGGAAGAGGCATTGGCGGAGCTGAAGGAAGTGGTGACGGAGCTGCGTGGAGAAGACTTTACGAAGCGGCAAATCGCTGCGGCGAAAGTGAGGTTACTCGCGAAGGAAGATTTGAAAGCGAGAGCGAATCTCGCAATGCTCGGAGCAATTCCTCCTCTGGTCGGAATGCTCGATTCGGAAGACGCTCGTTCTCAAATCGCTTCACTCTACGCTTTACTCAATCTCGGAATCGGCAACGATGCAAACAAAGCGGCTATTGTGAAAATTGGCGCCGTGCACAAGATGCTGAAGCTTATTGAGTTGAGTGGTTCGGATTCGTCGGTGTCTGAAGCGATTGTGGCGAATTTCCTTGGATTAAGTGCTTTGGATTCGAATAAGCCGATAATTGGATCCTCCGGTGCAATACCGTTCCTGGTTAGAACCCTAAAAAAGAATTTACATGATAGTAAAAGCGCAACCCAATCCCAATCGCAAGTGAAGCAAGATGCTCTGCGCGCTTTGTACAATCTTTCGATATGTCAGAGCAACGTTTCGGTGGTTTTGGAAACTGATTTGGTTTGGATTTTAGTGAACGCGGTAGGGGACATGGAAGTGAGCGAGAGGTGTCTTATGATTCTGAGCAATTTGGTGTCGAGTCCGGAGGGTAGAAAGGGTATTAGTGGTGTTAAGGATGCGATTCCGATTCTGGTGGACGTGTTGAGTTGGACGGATTCGCCAGAGTGCCAAGAAAAGGCGTCGTACGTTTTGATGATTATGGCGCACAAAGCGTATGGTGACAGGCGGGTGATGATAGAGGCAGGGATTGTATCGTCGCTGCTTGAGTTGACCCTTGTGGGTTCTACTTTGGCTCAGAAGAGAGCCTCAAGGATATTGGAGTGTTTGAGGGTGGACAAAGGGAAACAGGTTTCTGGGAGCTACGGTGGAAACTTGGGTGTCTCTGCTCCTATTTGTGGGTCTTCTTCGTCCAAGGGAGGTGGAGGAGGGAAAGGGTGTTTGGTGGTGGAGGAGGAAGATGGGGTGATGAGTGAGGAAAAGAAAGCGGTGAAGCAGTTAGTGCAGCAGAGTTTGCAGAACAATATGATGAAAATTGTGAAGCGGGCCAACTTGCGTCAGGATTTCGTTCCATCTACCCATTTTGCTTCACTCACTTCGAGTTCCACTTCCAAGAGCCTTCCATTTTGA 1470 0.5122 MAKCHRNNVGSIALHHRHSVKNATAGGHFRVLRRMIFDAVSCGGTSRYRYRQRGGDDGDDEDFSSAASHTEKEEKSEKLSDLLNAAESKTEAEAKKKEEALAELKEVVTELRGEDFTKRQIAAAKVRLLAKEDLKARANLAMLGAIPPLVGMLDSEDARSQIASLYALLNLGIGNDANKAAIVKIGAVHKMLKLIELSGSDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLKKNLHDSKSATQSQSQVKQDALRALYNLSICQSNVSVVLETDLVWILVNAVGDMEVSERCLMILSNLVSSPEGRKGISGVKDAIPILVDVLSWTDSPECQEKASYVLMIMAHKAYGDRRVMIEAGIVSSLLELTLVGSTLAQKRASRILECLRVDKGKQVSGSYGGNLGVSAPICGSSSSKGGGGGKGCLVVEEEDGVMSEEKKAVKQLVQQSLQNNMMKIVKRANLRQDFVPSTHFASLTSSSTSKSLPF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8188g00004 489 Gene3D - 62 248 IPR011989 -
Mupr8188g00004 489 SMART arm_5 175 217 IPR000225 GO:0005515
Mupr8188g00004 489 SMART arm_5 269 307 IPR000225 GO:0005515
Mupr8188g00004 489 SMART arm_5 133 173 IPR000225 GO:0005515
Mupr8188g00004 489 SMART arm_5 218 268 IPR000225 GO:0005515
Mupr8188g00004 489 SMART arm_5 308 350 IPR000225 GO:0005515
Mupr8188g00004 489 SUPERFAMILY ARM repeat 103 390 IPR016024 -
Mupr8188g00004 489 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 229 281 IPR000225 GO:0005515
Mupr8188g00004 489 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 28 489 - -
Mupr8188g00004 489 MobiDBLite consensus disorder prediction 48 80 - -
Mupr8188g00004 489 Coils Coil 69 114 - -
Mupr8188g00004 489 MobiDBLite consensus disorder prediction 50 80 - -
Mupr8188g00004 489 Gene3D - 249 401 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8188g00004 Mupr-Chr8188 28176 29782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8188g00004 122 388 U-box Gene Family AT3G46510 36.996 2.74e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8188g00004 - - gmx:100818576 699.508