Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8163g00007 ATGTTATATGCTGCTTCTATATTCTTATCTCCATTGGTCTCACTGCAAAAGGATGCTGATTTTGAATCTCCGGAAGCAAAAAAGCAAGCTCGTGGTTCTGCATCTACAAAGAGATCTCGTGCTGCAGAGGTCCATAATCTCTCAGAGAGGAGGCGCCGGGATAGAATTAATGAAAAGATGAAAGCTTTGCAAGAACTTATACCTCGGTGCAACAAGTCTGATAAAGCTTCAATGCTGGATGAAGCAATTGAGTACTTGAAGTCACTGCAATTACAAGTGCAGATGATGTCCATGGGATGTGGCATGGTACCTATGATGTTTCCTGGAATCCAGCAGTATATGCCACCAATGGGAATGGGGATGGGCATGGGTATGGGCATGGAAATGGGAATGGGAATGAACAGACCGGTAATGCCATTTCCCAATATGTTAGCTAGTTCGACTTTGCCAGCAGCAACCGCAGCTGCTCATTTGGGACCAAGGTTCCCTATGCCTCCTTTCCATATGCCCCGTGTTCCTGCACCTGATTCCTCCAGAATGCAACCAGCAAATCAGCCAGATAATAATAATATGCTTAACTCACTTGGTACACCAGATCCAGAGCAATCACGTGTCCCAAACTTCACTGATCCCTATCAGCAATACCTCAGTCTCCAACAGGTGCAGTTACAATTGATGCAGGCAATGAACCAACCAAATGTCAGCAAGCCTACTACCAGCAAGGGTCAAGAGAATCCAGAAAAGCACCAGTCAGCGCTGACAATTGAAATGGTGCTGCTGACTATTGGATCGCTGGTAGCAGTAACTCTCATCAGGGGATTGTTAGCTTTTCCGGCATCTACACAAAAGCTGCTAAGCGGTGTAATGTGCGAGAACTAA 879 0.4573 MLYAASIFLSPLVSLQKDADFESPEAKKQARGSASTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQYMPPMGMGMGMGMGMEMGMGMNRPVMPFPNMLASSTLPAATAAAHLGPRFPMPPFHMPRVPAPDSSRMQPANQPDNNNMLNSLGTPDPEQSRVPNFTDPYQQYLSLQQVQLQLMQAMNQPNVSKPTTSKGQENPEKHQSALTIEMVLLTIGSLVAVTLIRGLLAFPASTQKLLSGVMCEN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8163g00007 292 Pfam Helix-loop-helix DNA-binding domain 44 90 IPR011598 GO:0046983
Mupr8163g00007 292 MobiDBLite consensus disorder prediction 21 51 - -
Mupr8163g00007 292 SMART finulus 46 95 IPR011598 GO:0046983
Mupr8163g00007 292 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 21 236 IPR031066 -
Mupr8163g00007 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 118 IPR036638 GO:0046983
Mupr8163g00007 292 Gene3D - 35 98 IPR036638 GO:0046983
Mupr8163g00007 292 MobiDBLite consensus disorder prediction 174 201 - -
Mupr8163g00007 292 CDD bHLH_AtPIF_like 40 103 IPR047265 -
Mupr8163g00007 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 40 89 IPR011598 GO:0046983
Mupr8163g00007 292 FunFam Basic helix-loop-helix transcription factor 35 98 - -
Mupr8163g00007 292 MobiDBLite consensus disorder prediction 178 201 - -
Mupr8163g00007 292 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8163g00007 Mupr-Chr8163 17567 21535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8163g00007 22 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G28800 44.444 3.26e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr8163g00007 HLH 2.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8163g00007 - - gmx:100788491 357.066