Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8160g00001 ATGGACGGCAAGGGGAATGCAGCAAATTCAAAAGTAGCTTGTGAAACAAAAATACATTACAAGATGAGTGCTAAAAAGAATAGATGGAAGTCTGTGATCTTGATCTTAAGTTGTTACAAGGTTAAGTGCCCCTTGGAGGAATCAGAGAAACAGGTTTTGAAACAAGGTTCTTTCCAGAGGCTATGTCTATCTGATGTGAGCAATTCAAGCTCCACTCAGGCCATTGAGGATATTTCAATTTCCCTGGCTGGCTCAAAACTTTATGCATTCACACTTGAGGAGCTAAGGGAAGCAACACATAGTTTCTCATGGAGTAATATGCTAGGTGAAGGTGGGTTTGGACCTGTGTACAAGGGTTTTGTTGATGACAAACTTAGGCATGGTTTGAAAGCTCAGACTGTTGCTGTGAAAAGGTTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTAAGGCATCCACATCTTGTCAAGTTAATTGGGTACTGTTATGAGGATGAACACAGGCTTTTGATGTATGAATACATGCCAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGATACTCTGCTGCCATGCCATGGTCAACTAGAATGAAAATTGCATTGGGAGCTGCCAAGGGTCTTGCCTTCCTTCATGAAGCAGATAAGCCTGTGATATACCGCGATTTCAAAGCTTCAAACATTTTACTAGACTCAGATTTCACGGCTAAACTGTCAGATTTTGGTCTAGCTAAGGATGGCCCTGAAGGGGAAGACACACATGTCACAACACGCATAATGGGTACACAAGGCTATGCTGCTCCTGAGTACATCATGACAGGTCACCTTACAACAAAGAGTGATGTGTATAGCTATGGAGTGGTGCTGTTGGAATTGCTTACTGGAAGACGGGTAGTGGATAAGTCACGGTCGAATGGAGGGAAGAGCTTGGTGGAATGGGCAAGGCCTTTGTTGAGAGATCAAAAAAAAGTGTATAGCATCATAGACCGAAGACTAGAAGGGCAATTTCCCATGAAAGGAGCCATGAAAGTTGCTTTGTTGGCTTTTAAATGCTTGAGTCATCACCCAAATCCAAGGCCCACTATGAGTGATGTGGTAAAGGTATTGGAGCCACTTCAGGACTTCGATGATGTTTTCATTGGACCATTTGTGTATGTTGCCGTAAGTGAAAATAGTGACAAAGATAAAATATAG 1224 0.4297 MDGKGNAANSKVACETKIHYKMSAKKNRWKSVILILSCYKVKCPLEESEKQVLKQGSFQRLCLSDVSNSSSTQAIEDISISLAGSKLYAFTLEELREATHSFSWSNMLGEGGFGPVYKGFVDDKLRHGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLMYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVDKSRSNGGKSLVEWARPLLRDQKKVYSIIDRRLEGQFPMKGAMKVALLAFKCLSHHPNPRPTMSDVVKVLEPLQDFDDVFIGPFVYVAVSENSDKDKI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8160g00001 407 Gene3D Transferase(Phosphotransferase) domain 1 185 389 - -
Mupr8160g00001 407 Gene3D Phosphorylase Kinase; domain 1 63 184 - -
Mupr8160g00001 407 SUPERFAMILY Protein kinase-like (PK-like) 78 380 IPR011009 -
Mupr8160g00001 407 FunFam Probable serine/threonine-protein kinase PBL8 185 393 - -
Mupr8160g00001 407 Pfam Protein tyrosine and serine/threonine kinase 104 379 IPR001245 GO:0004672|GO:0006468
Mupr8160g00001 407 PANTHER OS01G0588500 PROTEIN-RELATED 67 383 - -
Mupr8160g00001 407 ProSiteProfiles Protein kinase domain profile. 102 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr8160g00001 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Mupr8160g00001 407 CDD STKc_IRAK 108 382 - -
Mupr8160g00001 407 FunFam Serine/threonine-protein kinase BIK1 68 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8160g00001 Mupr-Chr8160 1577 4405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8160g00001 90 379 Glycoside Hydrolase AT3G07070 52.901 5.64e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr8160g00001 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8160g00001 - - gmx:100802636 741.11