LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr8155g00004	ATGGGTCTCTGCACTTCGAAACCCACTCTTTCGTCTCACCAATCCAATACTCACTCCCCCGCGCCTTCTCAACACGACGCCGTCGCACTCACTACTACTAACAGTGCCGAACCTCATGCCAGCTCCGCCGATGGGCAAAACCCTAGCGAGGACAGGAAGGGGCCGGAGAACGGCAAGAGATCTCCGTTTTTCCCGTTCTACAGCCCGAGTCCGGGGCGCTACGTGTTTCCGCTCTCGCCGCGGCGGTTCTTCAAGCGTCCGTTTCCGCCGCCGTCGCCGGCGAAGCACATCAGAGCGGCGCTGGCGCGGCGGCACGGGCCGGTGAAGCCCAACGAGGCTGCCATACCGGAGGCGGAGTTGGCCGTTGGTCTGGACAAGAACTTCGGATTCTCGAAGCATTTTGGGAGTAAATATGATGTTGGAGATGAGGTTGGGAGAGGGCATTTTGGATACACTTGTGTTGCGAAGGTGAAGAAAGGAGAGCTGAAAGGCCAACAAGTGGCCGTTAAAGTCATTCCCAAAGCCAAGATGACCACTGCAATTGCTATTGAGGATGTGAGAAGGGAAGTAAAAATATTGAGAGCTTTGACTGGACACAAGAATCTAGTACAATTCTTTGATGCATATGAAGACCAAGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTGTTGGATAGAATATTATCAAGAGGTGGGAAGTACACAGAGGAAGATGCAAAAGCTGTCTTGAGACAAATATTGAATGTTGTTGCTTTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCACATCCAAGGATGAGAACTCAAAGCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGACTTAATGATATTGTTGGCAGTGCATACTACGTGGCTCCTGAAGTTCTACATAGAACTTACAGTACAGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGTCGTCCCTTCTGGGCCCGGACTGAGTCTGGTATTTTTCGTGCTGTATTGAAATCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTATCAGACGAGGCAAGGAATTTCGTTGAGCGGTTACTAAATAAAGATCCACGGAAAAGAATGTCTGCAGCACAGGCATTGAGTCATCCATGGATTAAAAACAAGGATGTAAAAGTACCTCTGGACATTCTAACATTTAAGCTCATGAAGGCATACATGCGTTCTTCATCCCTACGGAAAGCAGCCTTAAGGTGCTTCTCAATAACTTATTCGAATTTTTTTTCATGGGCATTGAGACAGGCTCTGTCTAAGACACTAACTGTTGATGAGCTCATTTATTTGAGGGAGCAGTTTGCTCTTTTAGAGCCAAGCAAAAATGGCACCATTAACTTGGAAAATATCAAAGCGGTCTTGATGGTAAATGCAACAGAAGCTATGAATGAGTCACGCATTCCTGACTTTCTGGCATCACTTAATGCATTACAATATAGAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGACCAGTGGGAGCAACTTGCACAATGTGCCTATGACCTTTTTGAAAAGGATGGAAACAAGGCCATAGTCATTGACGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTGTCCCCGTTCATGCTGTTCTCCATGATTGGATTCGGCACACCGATGGAAAATTAAGTTTCCTTGGATTTGTCAAACTGTTGCATGGTCCATCTAGAAGTCTTGCAAAAGCTCAATAG	1821	0.4607	MGLCTSKPTLSSHQSNTHSPAPSQHDAVALTTTNSAEPHASSADGQNPSEDRKGPENGKRSPFFPFYSPSPGRYVFPLSPRRFFKRPFPPPSPAKHIRAALARRHGPVKPNEAAIPEAELAVGLDKNFGFSKHFGSKYDVGDEVGRGHFGYTCVAKVKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFFDAYEDQDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSKLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRTYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKSDPSFDEPPWPSLSDEARNFVERLLNKDPRKRMSAAQALSHPWIKNKDVKVPLDILTFKLMKAYMRSSSLRKAALRCFSITYSNFFSWALRQALSKTLTVDELIYLREQFALLEPSKNGTINLENIKAVLMVNATEAMNESRIPDFLASLNALQYRRMDFDEFCAAALSVHQLEALDQWEQLAQCAYDLFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ	606

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr8155g00004	606	SUPERFAMILY	EF-hand	447	597	IPR011992	-
	Mupr8155g00004	606	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	262	274	IPR008271	GO:0004672\|GO:0006468
	Mupr8155g00004	606	MobiDBLite	consensus disorder prediction	1	48	-	-
	Mupr8155g00004	606	SMART	serkin_6	138	400	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8155g00004	606	Gene3D	Transferase(Phosphotransferase) domain 1	228	422	-	-
	Mupr8155g00004	606	CDD	STKc_CAMK	137	399	-	-
	Mupr8155g00004	606	ProSiteProfiles	Protein kinase domain profile.	138	400	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8155g00004	606	FunFam	CDPK-related kinase 1	451	524	-	-
	Mupr8155g00004	606	Pfam	Protein kinase domain	138	400	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr8155g00004	606	Gene3D	-	423	597	-	-
	Mupr8155g00004	606	FunFam	CDPK-related kinase 3	130	302	-	-
	Mupr8155g00004	606	PANTHER	SERINE/THREONINE-PROTEIN KINASE	125	581	-	-
	Mupr8155g00004	606	FunFam	Calcium-dependent protein kinase SK5	310	405	-	-
	Mupr8155g00004	606	FunFam	CDPK-related kinase 1	131	226	-	-
	Mupr8155g00004	606	Gene3D	Phosphorylase Kinase; domain 1	131	227	-	-
	Mupr8155g00004	606	ProSitePatterns	Protein kinases ATP-binding region signature.	144	170	IPR017441	GO:0005524
	Mupr8155g00004	606	MobiDBLite	consensus disorder prediction	1	65	-	-
	Mupr8155g00004	606	SUPERFAMILY	Protein kinase-like (PK-like)	135	443	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr8155g00004	Mupr-Chr8155	47718	52659	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr8155g00004	1	606	EF-hand Containing Proteins	AT3G50530	69.954	0.0	907

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CDPK	Mupr8155g00004		Pkinase	8e-71	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr8155g00004	K13412		-	gmx:100794177	1033.09