Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8128g00001 ATGAGGATTATGATAAAGGGTGGTGTTTGGAAGAACACCGAAGATGAAATCCTGAAAGCGGCTGTTATGAAATATGGCAAGAACCAGTGGGCTCGAATCTCTTCGCTCCTTGTTCGCAAATCTGCCAAGCAATGCAAAGCTCGCTGGTATGAGTGGCTTGATCCTTCCATAAAAAAGACTGAGTGGACGAGAGAAGAAGATGAGAAACTACTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACAATTGCTCCAATTGTGGGCCGTACCCCTTCCCAGTGTCTTGAGCGATACGAGAAGCTCCTTGATGCAGCCTGTGTGAAGGATGAGAACTATGAACCCGGTGATGATCCTCGGAAACTGCGTCCTGGGGAGATTGATCCGAACCCTGAGTCAAAACCTGCACGCCCGGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGGGCCCGGTTAGCCAACACAAAGGGCAAGAAAGCAAAAAGGAAAGCTAGGGAAAAGCAGCTTGAGGAAGCCAGGAGGCTTGCTTCTCTACAGAAAAAGAGAGAATTGAAGGCTGCCGGAATTGATATTAGGCAAAGGAAGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATTCCATTTGAAAAAAGGCCTCCTCCGGGTTTTTTTGATGTTACGGATGAAGATAGACCAGTGGAACAACCGAAGTTCCCTACTACAATTGAAGAACTTGAAGGAAAAAGGAGGGTTGATGTTGAGGCACAGTTAAGAAAGCAGGACATTGCGAAAAATAAGATTGCTCAAAGGCAAGATGCTCCATCTGCCATACTGCATGCAAACAAGCTGAATGACCCAGAAACAGTAAGAAAGAGGTCAAAACTGATGCTTCCACCGCCCCAGATTTCTGATCAGGAATTGGATGAAATTGCAAAGTTGGGTTATGCCAGTGACCTTGCAGGGAGTCAGGAACTTGCTGAAGGTAGTGGTGCAACACGGGCTCTTCTGGCTAATTATGGACAGATGCCTGGCCAAGGAATGACTCCTTTACGAACCCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCCAGGTTGAGGGAGTCTCAAACACCATTGTTAGGAGGAGAGAACCCGGAGTTGCATCCTTCAGATTTTTCAGGGGTCACTCCTAAGAAAAAGGAGATTCAGACTCCAAACCCAATGCTGACTCCTTCTGCAACTCCTGGAGGTGCAGGACTCACTCCTAGAATTGGCATGACACCATCAAGAGATGGTTTTTCTTTTAGCATGACACCAAAGGGAACTCCTCTTAGGGATGAGCTACATATTAATGAGGACACGAATATGCATGACAGCACTAAACTTGAGCTACAGAGACAAGCTGATATGAGAAGAAGTTTGCGCTCTGGTTTAGGAAGCCTTCCACAGCCCAAAAATGAGTACCAGATAGTGATGCAACCAGTTCCAGAAGACACTGAAGAGCCTGAGGTGAAGATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAGGCAGAAGAAGAGGCAAGGCAGCAGGCATTGCTTAGAAAGCGATCTAAAGTTCTTCAACGGGAACTTCCTAGGCCTCCTGCAGCATCATTGGAGCTTATAAGAAATTCCTTGATGAGAGCTGACGGGGACAAAAGTTCCTTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATTAGAAGGGAGCTTCTAACTTTACTGGAGCATGACAATGCTAAGTATCCACTTGATGAGAAAGTCTCCAAGGAGAAAAAGAAAGGAGCCAAGCGTGCCGCAAATGGGTCTGCTGTCCCTGTGATAGAAGATTTTCAGGAAGACGAAATGAAAAATGCTGATAAGTTGATAAAGGAAGAGGCCCAGTATCTTTGTGCAGCAATGGGACATGAAAGTGAACCCCTTGATGAATTTATTGAAGCACACAGAACTTGTCTCAATGATCTTATGTACTTTCCTACTCGTAATGCCTATGGTCTCTCAAGTGTTGCTGGGAACATGGAAAAACTAGCAGCTTTGCAGAATGAGTTCGAGAATGTGAGAAACAAATTGGATGATGGTAAGGAAAAGATGGTACGGCTAGAGAAGAAGGTGATGGTTCTCACACAAGGCTATGAGATGAGAGTAAAAAAGAGCCTATGGCCACAAATTGAGGCCACTTTCAAGCAGATGGACGTAGCCGCAACAGAGTTAGAATGCTTTAAA 2262 0.4514 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRKRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLAGSQELAEGSGATRALLANYGQMPGQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGLTPRIGMTPSRDGFSFSMTPKGTPLRDELHINEDTNMHDSTKLELQRQADMRRSLRSGLGSLPQPKNEYQIVMQPVPEDTEEPEVKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRADGDKSSFVPPTSIEQADEMIRRELLTLLEHDNAKYPLDEKVSKEKKKGAKRAANGSAVPVIEDFQEDEMKNADKLIKEEAQYLCAAMGHESEPLDEFIEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRNKLDDGKEKMVRLEKKVMVLTQGYEMRVKKSLWPQIEATFKQMDVAATELECFK 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8128g00001 754 Gene3D - 5 59 - -
Mupr8128g00001 754 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Mupr8128g00001 754 CDD SANT_CDC5_II 55 106 IPR047240 -
Mupr8128g00001 754 MobiDBLite consensus disorder prediction 399 413 - -
Mupr8128g00001 754 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Mupr8128g00001 754 MobiDBLite consensus disorder prediction 340 359 - -
Mupr8128g00001 754 Pfam Myb-like DNA-binding domain 10 70 - -
Mupr8128g00001 754 Coils Coil 167 187 - -
Mupr8128g00001 754 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 754 IPR047242 GO:0000398|GO:0000974
Mupr8128g00001 754 SMART sant 58 105 IPR001005 -
Mupr8128g00001 754 SMART sant 6 55 IPR001005 -
Mupr8128g00001 754 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Mupr8128g00001 754 MobiDBLite consensus disorder prediction 222 237 - -
Mupr8128g00001 754 FunFam CDC5 cell division cycle 5-like 5 59 - -
Mupr8128g00001 754 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Mupr8128g00001 754 MobiDBLite consensus disorder prediction 213 237 - -
Mupr8128g00001 754 MobiDBLite consensus disorder prediction 447 472 - -
Mupr8128g00001 754 Coils Coil 682 716 - -
Mupr8128g00001 754 Gene3D - 60 114 - -
Mupr8128g00001 754 CDD SANT 10 53 IPR001005 -
Mupr8128g00001 754 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Mupr8128g00001 754 FunFam CDC5 cell division cycle 5-like 60 120 - -
Mupr8128g00001 754 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Mupr8128g00001 754 MobiDBLite consensus disorder prediction 380 506 - -
Mupr8128g00001 754 MobiDBLite consensus disorder prediction 113 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8128g00001 Mupr-Chr8128 2 3743 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8128g00001 1 754 MYB-Related Transcription Factor Family AT1G09770 80.713 0.0 1198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8128g00001 Myb_Cef 2.4e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8128g00001 K12860 - gmx:100790369 1405.19