Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8124g00009 ATGTTTACGGTTATGGATAGCATGGAGAGGGGTTCAGAAAGGTGCTTAGATTCTCAACTATGGCATGCCTGTGCGGGTGCCATGGTTCAAATGCCAGGTCTAAACACAAAACTTTTCTACTTTCCCCAGGGACACGCAGAGCACGCTCATGGGAAGGTAGATTTTGGGCAAGCCCGTGTTCCAGTTCCGGCTTTCATCCCTTGCAGACTCTCTGGCATGAAATACATGGCAGACCCTGACACAGACGAGGTGTATGTGAAAATGAGGCTGACCCCTTTGAGGGAACATGAATTGGATTTGGAGGATGGTTGTTTCTTGGGGAACACTGGTGTGGAGGGACAGGAGAAGCCTCCCACTTCTTTTGCCAAGACACTCACGCAATCCGATGCCAACAACGGTGGAGGCTTCTCTGTGCCTCGTTACTGTGCTGAGACCATCTTCCCAAGGTTGGACTATTCGGCTGAGCCTCCTGTTCAGACCATCATTGCCAAGGATATGCATGGTATGTGCTGGAAGTTTAGGCACATCTATAGAGGGACACCCAGGAGGCATCTCTTGACCACTGGATGGAGCAATTTCGTTAACCAGAAGAGACTTGTTGCTGGGGATTCCATTGTTTTTCTCAGGGCAGAAAATGGGGATCTTTGTGTTGGGATAAGGAGGGCCAAGAAGGGGATTGGTGGAGGGGCCGAGTTCTCTTCTGGCTGGAACCCTCTCTTTGGTGGGGGTTCTGCTTTCTTGTGTGGGACTGAGGGCAGTTTGGTGAGTGGTGCAAAAGGTGCTGATGACATGGTGGGAAGAGTGCCTGCTGAATCTGTTCTTGAGGCTGTCACTTGTGCTGTTAATGCTAGGCCCTTTGAGGTTGTGTACTACCCAAGGGCTACCTCACCAGAGTTTTGTGTCAAGGCTTCTCTTGTTAAGGCTGCAATGCAAATTCAGTGGTGTTCTGGGATGAGATTCAAAATGCCCTTTGAAACTGAGGATTCTTCTAGGATCAGCTGGTTCATGGGAACCATTTCTTCTCTTCAGGTTGCAGATCCCATCCGTTGGCCTGATTCTCCTTGGCGTCTTCTGCAGGTAGTGTGGGATGAGCCAGATTTACTTCAAAACGTCAAGTGTGTAAACCCTTGGTTGGTTGAACTAGTCTCAAACATGCCCACCTTCAATCTCTCTGCATACTCACCTCCTAGAAAGAAACAACGCTTCATACAGGACCCATATTTTCAAGTCATCAACCAACTCCCAATGCCATCATTCTCTAGCAATGTTCTCAATTATACAAACTCTCTTTGTACCATACAAGATAATAATAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTATCTCCATCTGATTTTCCCTTCAACAAGCTCCAAGCAGACATGCTTCTAGGTGGTTTCTCAAGGCTTGACCATGCAGCACAACCTGTTAGGCCTCCTTGTGGAACCTATAAGAACAACACTACTACTAAGGCCAATGTTGATATATCTTGCTTGTTGACTGTGGGAAATCCTGGCCAGAATTTTAAGGAATCCAATGAAAGAAAAGCACCCCATATCTTGTTATTTGGAAAACTCATTACCACTGAGCAAAAGAGTTCAAACACTAGCTCTGGTAGTACAACTGGGAATAGTGTGTCTGAGGGGAATTCACTCAAGACATCTAAATCTAATGCTTCTGATGGCCTAGGTTGTGCTTTGCATCAAGGTAGCCCAATTGAGAACAATTCTGATGGAGGATCTCCCTGGTACAAGGATCAACACAAGTCTGATCTTGGAACCGACAAAGTTAACACATTATGTATTGCTTTATAA 1827 0.4658 MFTVMDSMERGSERCLDSQLWHACAGAMVQMPGLNTKLFYFPQGHAEHAHGKVDFGQARVPVPAFIPCRLSGMKYMADPDTDEVYVKMRLTPLREHELDLEDGCFLGNTGVEGQEKPPTSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGMCWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGAEFSSGWNPLFGGGSAFLCGTEGSLVSGAKGADDMVGRVPAESVLEAVTCAVNARPFEVVYYPRATSPEFCVKASLVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSLQVADPIRWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPTFNLSAYSPPRKKQRFIQDPYFQVINQLPMPSFSSNVLNYTNSLCTIQDNNSSAGIQGARHAQFGLSPSDFPFNKLQADMLLGGFSRLDHAAQPVRPPCGTYKNNTTTKANVDISCLLTVGNPGQNFKESNERKAPHILLFGKLITTEQKSSNTSSGSTTGNSVSEGNSLKTSKSNASDGLGCALHQGSPIENNSDGGSPWYKDQHKSDLGTDKVNTLCIAL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8124g00009 608 MobiDBLite consensus disorder prediction 536 587 - -
Mupr8124g00009 608 Pfam B3 DNA binding domain 121 222 IPR003340 GO:0003677
Mupr8124g00009 608 SUPERFAMILY DNA-binding pseudobarrel domain 112 222 IPR015300 -
Mupr8124g00009 608 CDD B3_DNA 120 221 IPR003340 GO:0003677
Mupr8124g00009 608 MobiDBLite consensus disorder prediction 536 593 - -
Mupr8124g00009 608 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 561 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr8124g00009 608 Gene3D - 314 387 - -
Mupr8124g00009 608 Gene3D - 119 223 IPR015300 -
Mupr8124g00009 608 FunFam Auxin response factor 119 223 - -
Mupr8124g00009 608 Pfam Auxin response factor 277 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr8124g00009 608 FunFam Auxin response factor 314 387 - -
Mupr8124g00009 608 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Mupr8124g00009 608 SMART B3_2 121 223 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8124g00009 Mupr-Chr8124 51776 54383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8124g00009 1 594 B3 DNA Binding Superfamily AT4G30080 56.623 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr8124g00009 B3 6.8e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8124g00009 - - ccaj:109810654 1098.96