Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr810g00003 ATGGCTGATTCCAAGGAGAAGAATCGTAAATTTGTGGAGACCATTGAACTCCAAATTGGGCTGAAAAACTATGACCCCCAGAAGGACAAGCGTTTCAGTGGCTCTGTTAAATTGCCCCACATCCCTCGCCCCAAGATGAAGATTTGCATGCTTGGAGATGCCCAACACGTTGAGGAGGCCGAGAAGATAGGATTGGACTACATGGATGTAGAGGCCTTGAAGAAGCTTAACAAAAATAAGAAATTGGTTAAGAAACTAGCTAAAAAATATCATGCCTTTTTGGCTTCTGAAGCAGTCATCAAGCAGATTCCCCGTCTCTTGGGTCCTGGGAAGTTCCCTACTCTTGTGACTCACCAAGAATCTCTTGAGTCAAAGGTTAATGAGACAAAGGCTATGGTCAAATTCCAGCTTAAGAAGGTGCTCTGTATGGGAGTTGCAGTGGGGAATGTTAGCATGGAGGAAAAGCAAATCTTCCAAAATGTACAACTGAGTGTTAACTTTCTTGTCTCCTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCTTGTATCTGAAGAGTACCATGGGGAAATCGTACCGGGTGGACAGAATTTTTCCGCGTTCTACAGTTTTGTTGGATGTGTATTTT 627 0.4322 MADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVDRIFPRSTVLLDVYF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr810g00003 209 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 189 - -
Mupr810g00003 209 SUPERFAMILY Ribosomal protein L1 6 195 IPR023674 -
Mupr810g00003 209 CDD Ribosomal_L1 5 194 IPR028364 -
Mupr810g00003 209 FunFam Ribosomal protein 49 133 - -
Mupr810g00003 209 FunFam Ribosomal protein 116 193 - -
Mupr810g00003 209 Gene3D - 5 190 - -
Mupr810g00003 209 Pfam Ribosomal protein L1p/L10e family 6 189 IPR028364 -
Mupr810g00003 209 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 2 197 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Mupr810g00003 209 Gene3D - 49 133 IPR016095 -
Mupr810g00003 209 FunFam Ribosomal protein L10a 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr810g00003 Mupr-Chr810 21402 23950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr810g00003 4 194 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 88.776 9.77e-113 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr810g00003 K02865 - gmx:100527698 357.836