Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr810g00001 ATGTACCATCATCACCAACACCAAGGAAAAAACATTCATCCTTCTTCCAGAATGTCAATCCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAATGGGTCTGGTGATTCTGGACTTGTGCTTTCAACTGATGCTAAGCCTAGATTAAAATGGACACCAGATCTTCATACCAGGTTTATAGAAGCAGTCAATCAGTTAGGGGGTGCTGACAAGGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCGGGGCTTACCTTGTATCATCTAAAGAGCCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCATGTACAAAGCAACAACGTGACCCACAAAATTACAACAAATGCAGGTGCACCAACTGGGGAGAGACTAGCTGAAACCAATGGGACTCACATGAACAAATTAAGCCTTGGACCACAGGCTAACAAAGATTTGCATATAAGCGAGGCACTGCAGATGCAGATTGAGGTGCAGAGAAGGCTCAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTAGGATAGAAGCCCAAGGAAAATACCTGCAGTCTGTGCTGGAGAAAGCTCAAGAGACTCTTGGCAGACAAAATTTGGGAATAGTAGGACTTGAAACTGCCAAAGTTCAACTTTCAGAGCTGGTGTCCAAAGTCTCATCTCAGTGCCTTAACTCAGCATTCTCAGAGCTGAAGGAGTTGCAAGGATTTTGCCCTCAGCAAACTCAAACCAACCAGCCAAACGATTGCTCAATGGACAGTTGCCTCACATCCTGTGACAGATCACAAAAGGAGCAAGAGATTCAAAATGGCTTACGACACTTCAACAGCCATGTATTCATGGAACAAAAGGAAGCCACAGAAGCACCCAACAACATTAGGAACTGTGAGCTCAAGTGGTGTGATGATGGGAAAAAGAACACCTTCCTTGCCCCATTGAGCAAGAATGAAGAAAGAAGAAGCTATGCTGTTGAAAGCAGTCCCAGCAACTTATCCATGTCCATTGGACTAGAAAGAGAAACAGAAAATGGAAGCAGCATGTATCCCGAGAGACTAATTACAGAAAACCAACCAGATGGTGAGTTCCAGCACAGGAACAGAATCAAGACAGAAACAATGAAACCAGTGGATGAAAAGGTTTCTCAAGATTATAGGTTGCCTGCTTCTTACTTTGCAGCAGCAAGATTGGACCTGAACTCCCATGGAGATAATGAAGCTGCAACCACTTGTAAACAACTGGACTTGAATAGATTCAGTTGGAGC 1266 0.4376 MYHHHQHQGKNIHPSSRMSIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHTRFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHVQSNNVTHKITTNAGAPTGERLAETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLETAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQTQTNQPNDCSMDSCLTSCDRSQKEQEIQNGLRHFNSHVFMEQKEATEAPNNIRNCELKWCDDGKKNTFLAPLSKNEERRSYAVESSPSNLSMSIGLERETENGSSMYPERLITENQPDGEFQHRNRIKTETMKPVDEKVSQDYRLPASYFAAARLDLNSHGDNEAATTCKQLDLNRFSWS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr810g00001 422 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Mupr810g00001 422 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Mupr810g00001 422 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 305 IPR044848 GO:0003700
Mupr810g00001 422 Coils Coil 151 171 - -
Mupr810g00001 422 Pfam MYB-CC type transfactor, LHEQLE motif 149 195 IPR025756 -
Mupr810g00001 422 Gene3D - 45 103 - -
Mupr810g00001 422 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Mupr810g00001 422 FunFam Myb family transcription factor 45 103 - -
Mupr810g00001 422 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr810g00001 Mupr-Chr810 8068 10972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr810g00001 78 422 G2-like Transcription Factor Family AT3G04030 50.708 2.83e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr810g00001 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr810g00001 - - gmx:100810396 782.711