Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8093g00001 ATGGCCATCAGAGGCGTCAATTTCAAATGGTTCGATGGCTTTTTCTTGTCCATGCTCGCCACCAGCATAGCTATTGTGGCAATTAATTGGAAGCGGTACCAATCTTGTACATACCCTTTGCACATATGGACTGTGGTTGACTACGCCACTGTTTTCACTTTCCGGCTTTTGATGTTTGTTGATAATGGGCTTGCTTCGGGAATGGGTTTAGATTTTGGGTGGCCACAGAGATATGCTCGTTTTTGTGGAAGAGTAGTTGTACTTTCAATCCTTGCATTGCTTCTCTATCCATTTCTTTGGGCTTGGACTATAATTGGTACCCTGTGGTTCAGCAACACTAAAATCTGTTTGCCTGGTGGGGGTCAGAGATGGGGCTTCCTTATCTGGTTACTTTTTAGCTACTGTGGACTCCTTTGTATTGCTTGCATGGCAATGGGGAAGTGGTTGAAACGAAGACAAGCACACTTGTTAGGTGCTCAAGAGGGTATCCCTGTATCAGCATTTGGGGTTCTAGTTGAAATGATCCGCGTACCTGATTGGGCATTTGAAGCTGCAGGTCAAGAAACAAGGAGCATGGCCCAAGATGCTGCATATCATCCTGGACTTTACCTAACTCCAGCCCAGAGAGAAGCAGTTGAAGCTTTAATTCATGAAATCCCATCGTTCCGGTTAAATGCTGTTCCCAGTAATTGCAGTGAATGCCTAATCTGCCTAGAAGAGTTCCATGTAGGGAATCAGGTCCGTGGCCTGCCCTGTGCACATAATTTTCACGTTGAATGCATTGATGAGTGGCTTCGGCTTAATGTGAATTGTCCTCGGTGCCGTTGCTCAGTGTTTCCTAATCTTGATCTTAGTGCTTTGTCCAATGTCCGTTCTGAGTCTGAACAGTCTTCTGCCAGCGCTGTGACAAACAGACATGTGATAGACCAAGCTTCTAGTCAGAGTTACCTGTTGAGATTACAGGGGCTTCTCCGTCCTGTATGTGCTGAAATTGCAGGACCAGTTGGCGAGACAGATAATGCCTTGGAAAATGCTGAAAATGGTGTTGGACCTGCTGTCACTGTCACTGTCACTGTCACTCCAAATATGTCAACTGGAGATCATGCCACTTCTAAATCACCATCTTCCAATTTGGGCCTGGCCCACCCTCCCCAGCCCAATCTTTCATTCTCCTCCCGAAGGAACCGCAACAACAACATCCACTCTTGCCGCTGCACCCTCAATTCCGACGATACTTTCCCTAACTGGGATTGGAATCGATGGTGCCGCCATTTCTCCGAAATCGAACAGGCCGAGAACTTCGCCTCTGTCCTCAAGTTTCAACTTGATGATGCTATTGAGAAGGAGGACTTTCAAGAAGCGGTTAAGTTGAAGAGGGCCATAGCGGAAGCAACGTCCAAGGACACTGTTGCTGAAATTATGGCTCAGTTGAAGAATGCTATAGATGATGAACGTTATCTTGATGCTTCCAGATTGTGTAAAGATACAGGAAGTGGACTGGTCGGTTGGTGGGTAGGGTACTCAAAAAGTTCAGATGACCCCTTTGGTAGAATTATACATATAAGTCCTGGTATGGGTAGATTCATTGGCAAGAGTTACAGTCCAAGACAGTTGATCACAGCGTCTACTGGGACTCCAATTTTTGAAATTTATGTGGTAAAAAATGCTGATGACACATATCATATGCAGGTAGTGTATTTGCGACAAGCCAAAGGTAAGTCAAGGAGAAACCCTCCATCTATACCTGCTAAAGGCCCATCCAAACCTGAGGTGGAGAATGCATCAACAGATGAGGTTCCGGAACATGAAGAGAAGGTTGAGAGAAATGATGAGAAAAACAGTAATATTGAGGGAGCAACTGAGGAGGGCATTAAAAGTGTCATAAATTTTCTTAAAGAAAAAATTCCAGGATTGAAAGTCAAAGTTATGAATGTTAATGTTGAAGAGGAAGCGGCAGAGGATAATGATTCTATTAAGCAATTGATGGAAGAAGATAGTAATAAAACAGGCTCCAGTGAGAATCATGAAGAGGAAGTTAATAATCTGGATGAACCTGATGGGGTCACTCTAGGAAGAGATGGTGATGCCACAGAGGAAGAAAAGGATTTGGATATGAAGCTTTTTATTGGTGGGGTTGTACACAACAATGAAGATACTCCTGTCAAGGATGAATTTATACGTCTTCCAGCTGTAATAAATAATATGGAAAAGGATTCTTTTGTCTTTCATTTTACTAAGAAAAATCTAGATTATGGTATTAGAGAAGATAAAGTTCCTGATATCAAAGTGGCAGCTCTAGCAGCGCAAGGAGTCTCAGAGCTTATGCCTCCTGATGTTGCTAAGGCATTTTGGAGTTCTGACAAAGTCTCTTCTAAGGTCTCCAAAAGCATGCGTGAAATTGTGAAACTTGCTATGAGTCAGGCACAGAAAAGAACTAGATTATGTGGGGATACATATTTTAGCCGGATTACCTGTTCAAGAGGGGATTCTGATCCTTTTGATGGACTCTATGTTGGTGCATTTGGCCCTTATGGCATGGAAATAGTGCATTTGAGGCGAAAATTTGGACATTGGAATGATGAAGTGGACAATGAAAACAACACTCCAGACGTGGGATTCTTTGAATATGTAGAGGCTGTGAAGTTAACTGGGGATCTTAATGTTCCTGCTGGCCAGGTGACATTCCGTGCTAAAATTGGCAGAGGCAATCGCAACACCAATCGTGGGATGTATCCTGATGAATTAGGAGTGGTTGCTAGTTATAAAGGCCAGGGGAGAATAGCTGACTATGGTTTTCGAAATCCAAAATGGGTCGATGGAGAACTGCTTCAACTTAATGGCAAGGGCATGGGACCATACATGAAAGGTGCAGATATTGGTTTCCTTTATGTTGTGCCTGAGCAAAGTTTTCTTGTGTTGTTCAACCGGTTGAAACTACCTGAGTGA 2946 0.4355 MAIRGVNFKWFDGFFLSMLATSIAIVAINWKRYQSCTYPLHIWTVVDYATVFTFRLLMFVDNGLASGMGLDFGWPQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSNTKICLPGGGQRWGFLIWLLFSYCGLLCIACMAMGKWLKRRQAHLLGAQEGIPVSAFGVLVEMIRVPDWAFEAAGQETRSMAQDAAYHPGLYLTPAQREAVEALIHEIPSFRLNAVPSNCSECLICLEEFHVGNQVRGLPCAHNFHVECIDEWLRLNVNCPRCRCSVFPNLDLSALSNVRSESEQSSASAVTNRHVIDQASSQSYLLRLQGLLRPVCAEIAGPVGETDNALENAENGVGPAVTVTVTVTPNMSTGDHATSKSPSSNLGLAHPPQPNLSFSSRRNRNNNIHSCRCTLNSDDTFPNWDWNRWCRHFSEIEQAENFASVLKFQLDDAIEKEDFQEAVKLKRAIAEATSKDTVAEIMAQLKNAIDDERYLDASRLCKDTGSGLVGWWVGYSKSSDDPFGRIIHISPGMGRFIGKSYSPRQLITASTGTPIFEIYVVKNADDTYHMQVVYLRQAKGKSRRNPPSIPAKGPSKPEVENASTDEVPEHEEKVERNDEKNSNIEGATEEGIKSVINFLKEKIPGLKVKVMNVNVEEEAAEDNDSIKQLMEEDSNKTGSSENHEEEVNNLDEPDGVTLGRDGDATEEEKDLDMKLFIGGVVHNNEDTPVKDEFIRLPAVINNMEKDSFVFHFTKKNLDYGIREDKVPDIKVAALAAQGVSELMPPDVAKAFWSSDKVSSKVSKSMREIVKLAMSQAQKRTRLCGDTYFSRITCSRGDSDPFDGLYVGAFGPYGMEIVHLRRKFGHWNDEVDNENNTPDVGFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRNTNRGMYPDELGVVASYKGQGRIADYGFRNPKWVDGELLQLNGKGMGPYMKGADIGFLYVVPEQSFLVLFNRLKLPE 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8093g00001 981 Coils Coil 644 664 - -
Mupr8093g00001 981 MobiDBLite consensus disorder prediction 650 697 - -
Mupr8093g00001 981 SMART ring_2 234 274 IPR001841 -
Mupr8093g00001 981 Pfam Cyclin D1 binding domain 820 979 - -
Mupr8093g00001 981 CDD RING-H2_SIS3 233 278 - -
Mupr8093g00001 981 SUPERFAMILY RING/U-box 219 282 - -
Mupr8093g00001 981 Coils Coil 602 622 - -
Mupr8093g00001 981 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 371 981 IPR044680 GO:0010343
Mupr8093g00001 981 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
Mupr8093g00001 981 MobiDBLite consensus disorder prediction 594 618 - -
Mupr8093g00001 981 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 280 IPR013083 -
Mupr8093g00001 981 MobiDBLite consensus disorder prediction 362 393 - -
Mupr8093g00001 981 Pfam Ring finger domain 233 275 IPR001841 -
Mupr8093g00001 981 MobiDBLite consensus disorder prediction 571 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8093g00001 Mupr-Chr8093 17263 34176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8093g00001 58 358 C3H Transcription Factor Family AT3G47990 68.301 5.48e-141 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8093g00001 - - gmx:100786321 1066.99