Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8076g00002 ATTGTCTTGCTGCGAATATATTTGATGGCCATTACACCTTTTGGTAGTACATCAGCCACTCAATGGGGAATTCGTCCTCAGATTTTTGCGGGATCGATTGGGATGGGGAAGATTGCTTCATCCAAGCACAATGTTACAAGCAGGATAAGCTTTATGGCTGCCCCTAGTTCAAGCTTTTTTTCTCGAGATTCCTTGCACGCACCATTTGACAAAGGTTCATCACAAACTTTGCACCGGCGCAGGGGATTAGGGTTGATAGTTAGAGCAGATGCAGATTACTATTCTGTCCTTGGGGTGTCAAAAAATTCTAGTAAATCTGAAATTAAGACTGCTTATCGGAAGCTTGCCCGGAGTCATCATCCTGATGTGAGCAAAGAACCTGATGCAGAAAAGAAATTTAAGGAAATTAGTAATGCATACGAGGTCTTGTCAGATGATGAGAAAAGATCCATATATGACAAATATGGAGAGGCTGGCCTTAAAGGTTCAGGAATGGACATGGGGGATTTCAGCAATCCTTTTGACCTGTTCGAGTCACTGTTTGAGGGCATGGGTGGCATGGGGGGTGGCAGAGGTTCTTGGAATGGAGCGGTTGATGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTCAAAGAAGCCGTTTTTGGGGTGGAAAAGGAGATAGAGGTTCGGCGATTAGAGAGCTGTGGGACTTGCAATGGTTCAGGGGCTAAACCAGGGACTAAATCATCCAGGTGTAGCACTTGTGGCGGTCAGGGTCGGGTTGTCTCATCCACAAGGACTCCATTAGGCATCTTTCAGCAGTCTATGACTTGCTCTTCTTGCAATGGAACTGGAGAAACTTCAACACCTTGCAATACATGTTCTGGGGAAGGTCGAGTGAGGAAGACAAAGCGGATAAGTCTCAAGGTTCCTGCCGGTGTGGATTCTGGTAGCCGTTTAAGGGTCCGAAATGAAGGTAATGCTGGAAAGCGTGGGGGTTCTCCTGGCGACCTCTTTGTTGTTCTTGAAGTTATCCCTGATCCCGTGCTTAAGCGAGATGACACAAACATTTTATACACATGTAAGGTGTCTTATATTGATGCAATCTTGGGGACTACAATTAAGGTTCCTACTGTAGATGGCACAGTGGATTTAAAGATCCCAGCTGGGACTCAACCAAGCTCAACACTCGTCATGTCTAAGAAAGGTGTTCCCGTACTGAATAAAAAGAATATGAGGGGTGATCAATTGGTTAGGGTGCAAGTTGAAATCCCCAAAAAGCTGAGCAAAGATGAGAGAAAACTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCTGCCACCATTGAGGAATGTGGCATGGCATGGCATGACGGTGGAGGCCCATGGCTGAAGGTCACATTGGTTTACCGTTTTAGCAGTATTGGTGCGTAG 1425 0.454 IVLLRIYLMAITPFGSTSATQWGIRPQIFAGSIGMGKIASSKHNVTSRISFMAAPSSSFFSRDSLHAPFDKGSSQTLHRRRGLGLIVRADADYYSVLGVSKNSSKSEIKTAYRKLARSHHPDVSKEPDAEKKFKEISNAYEVLSDDEKRSIYDKYGEAGLKGSGMDMGDFSNPFDLFESLFEGMGGMGGGRGSWNGAVDGEDEYYSLVLNFKEAVFGVEKEIEVRRLESCGTCNGSGAKPGTKSSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGETSTPCNTCSGEGRVRKTKRISLKVPAGVDSGSRLRVRNEGNAGKRGGSPGDLFVVLEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGTVDLKIPAGTQPSSTLVMSKKGVPVLNKKNMRGDQLVRVQVEIPKKLSKDERKLIEELADLSKGKTAATIEECGMAWHDGGGPWLKVTLVYRFSSIGA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8076g00002 474 FunFam Chaperone protein dnaJ 1, mitochondrial 340 447 - -
Mupr8076g00002 474 PRINTS DnaJ domain signature 94 112 IPR001623 -
Mupr8076g00002 474 PRINTS DnaJ domain signature 148 167 IPR001623 -
Mupr8076g00002 474 PRINTS DnaJ domain signature 112 127 IPR001623 -
Mupr8076g00002 474 PRINTS DnaJ domain signature 128 148 IPR001623 -
Mupr8076g00002 474 CDD DnaJ 92 145 IPR001623 -
Mupr8076g00002 474 Gene3D DnaJ domain 89 192 IPR036869 -
Mupr8076g00002 474 CDD DnaJ_zf 230 293 IPR001305 GO:0031072|GO:0051082
Mupr8076g00002 474 ProSitePatterns Nt-dnaJ domain signature. 133 152 IPR018253 -
Mupr8076g00002 474 ProSiteProfiles Zinc finger CR-type profile. 217 298 IPR001305 GO:0031072|GO:0051082
Mupr8076g00002 474 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 217 297 IPR036410 -
Mupr8076g00002 474 FunFam Chaperone protein dnaJ A6 chloroplastic 89 192 - -
Mupr8076g00002 474 Gene3D - 200 335 - -
Mupr8076g00002 474 CDD DnaJ_C 201 423 - -
Mupr8076g00002 474 Pfam DnaJ central domain 230 293 IPR001305 GO:0031072|GO:0051082
Mupr8076g00002 474 FunFam Molecular chaperone DnaJ 222 298 - -
Mupr8076g00002 474 FunFam Putative Mitochondrial DnaJ chaperone 278 335 - -
Mupr8076g00002 474 SUPERFAMILY HSP40/DnaJ peptide-binding domain 198 353 IPR008971 GO:0006457|GO:0051082
Mupr8076g00002 474 NCBIfam molecular chaperone DnaJ 92 436 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mupr8076g00002 474 SUPERFAMILY HSP40/DnaJ peptide-binding domain 345 431 IPR008971 GO:0006457|GO:0051082
Mupr8076g00002 474 Gene3D - 340 451 - -
Mupr8076g00002 474 Gene3D - 230 293 - -
Mupr8076g00002 474 ProSiteProfiles dnaJ domain profile. 92 156 IPR001623 -
Mupr8076g00002 474 Pfam DnaJ C terminal domain 205 420 IPR002939 -
Mupr8076g00002 474 Hamap Chaperone protein DnaJ [dnaJ]. 89 469 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mupr8076g00002 474 SMART dnaj_3 91 148 IPR001623 -
Mupr8076g00002 474 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 54 442 - -
Mupr8076g00002 474 Pfam DnaJ domain 92 153 IPR001623 -
Mupr8076g00002 474 SUPERFAMILY Chaperone J-domain 89 193 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8076g00002 Mupr-Chr8076 9007 13752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8076g00002 93 155 C2H2 Transcription Factor Family AT1G74250 44.928 4.26e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8076g00002 K03686 - gmx:100786143 795.038