Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8062g00017 ATGACACAACCATCTGCGCCTCCGCCTCCTCCTCCTCCGTCGCTGTCACCACCGCCACCGCCACCGACACTGACACCGACGACTCCGCCGCCGCCTCAGCCGGCCGAGAGCGTCCGCGTGCGCTGCGCCGGCTGCCGCATGATCCTGACCGTGGCGCCCGGTCTGACCGAGTTCGCGTGCCCTACCTGCCGAATGCCGCAGATGCTTCCGCCGGAGCTCATGCCTAGGGCCGCCACCACGGCGGCGGCACCGGTGCCTCCGACTTCCGCACCGGCGTCGCAGCCGGCGCACGCGCCGGCTCACGGCATTGATCCCACTAAGATCCAGCTTCCCTGCGCTTCGTGCAAGGCCATCCTCAACGTCCCTCACGGCCTCGCGCGCTTCGCTTGCCCTCAGTGCGGCGTTGACCTCGCCGTCGATGTCTCCAAGGTCAAGCAGTTCTTCCCCGCCGCGCCGCCGGCGGAAGAAGTTAATGAGGTTGCTGTTGAAGTGGAGCGGGACGAAGATGAAGGTGGCATGGCTGGAGAAACATTTACAGATTATCGGCCGCCAAAAGTATCTATTGGACCTCCACACCCAGATCCTGTTGTGGAGACATCTTCCTTGTCTGCAGTGCAGCCACCCGAGCCAACTTATGATCCAAAAGTTAAAGATGAATTGGAAAGTTCAAAGGCTTTGTCATGCTTGCAAATTGAGACATTGGTCTATGCTTGTCAGAGACACCTTCAACACCTCCCAAATGGAGCTAGGGCAGGATTCTTTATTGGAGATGGAGCTGGTGTAGGTAAAGGTCGAACAATTGCAGGGCTAATTTGGGAGAACTGGCATCATAGAAGGAGGAAAGCATTGTGGATTTCTGTTGGTTCAGACTTAAAGTTTGATGCTAGAAGAGACTTGGATGATGTGGGTGCAACAAGTGTTGAAGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTGATTCAAAGTCTGTTGGGATCAGGGAGGGAGTTCTTTTCTCAACGTACAATAGCCTCATAGCATCTTCTGAGAAAGGTCGCTCTCGTCTCCAGCAGCTTGTACAGTGGTGTGGACCAGGGTTTGATGGTCTTATAATTTTTGATGAGTGTCACAAAGCAAAAAATTTGGTCCCTGAAGCTGGTAGTCAGCCAACACGAACTGGAGAAGCAGTGCTTGATATCCAGATTTGCTATTTGTGGCACTTTGCAATATTTAGCATTGAAATTGTGGGTACAAAATGTGGTTTGAGTTATTGCTGTCTAATTTCACAGGATCGACTACCTGAGGCTCGTGTTGTTTATTGCTCAGCAACTGGAGCATCTGAACCTCGCAATATGGGTTATATGGTTCGACTTGGTCTTTGGGGATCTGGGACTTCATTCTCTGATTTCCGTGAATTTCTAGGTGCTCTTGACAGAGGTGGTGTTGGAGCTCTTGAATTAGTTGCCATGGATATGAAAGCAAGGGGTATGTATTTATGTCGGACACTTAGTTATGAGGGTGCAGAGTTTGAAGTTATCGAAGCACCATTAGAAGATAAAATGATGGAAATGTATAAAAAGGCAGCAGAATTTTGGGCTGAATTGCGGGTAGAATTGCTATCAGCCAGTGCCTTCCTAAATGATAAACCTAATTCTAGTCATCTATGGCGATTATACTGGGCAAGCCACCAGCGTTTCTTTAGACACATGTGTATGTCTGCTAAAGTCCCTGCTAGTGTGAGACTAGCGAAGCAAGCATTAGTTAAAGAAAAATGTGTAGTCATTGGTCTTCAGAGTACTGGAGAAGCAAGGACAGAGGAAGCTGTGACAAAATATGGTTCTGAACTTGATGACTTTGTTTCTGGACCTCGAGAATTGCTGCTTAAATTTGTGGAAGAAAATTACCCATTACCAGAAAAACCTGAACTTCTGCCAGGAGAGGATGGGGTAAAGGAACTCCAAAGGAAGAGGCACTCTGCAAATCCTGATGTTTCAGTAAAAGGAAGGGTCAGAAAAGTACCCAAGTGGCAACCTCCTAGTGATGCTGAAAGTGATGAAGAATCTGAAACTGACTCTGCCATTGAATCTACTGACTCTGATGATGAGTTTCAAATATGTGAAATTTGCACTTCTGAGGAGGAAAGGAAAAAATTGCTGCAATGTTCATGCTGTGGTAAATTAGTCCATTCCACATGCTTGATGCCACCAATTGGTGATATAGTTCCTGAAGAGTGGTCATGCCATTTGTGTAAGGAAAAAACAGATGAATATCTTCAAGCAAGACAGGCCTACATAGCTGAACTTCAGAAGAGGTATGACGCAGCCTTGGAACGCAAGACAAAAATATTAGAGATAATTCGTTCTTTGGATCTTCCAAATAATCCTTTGGATGATATTATTGACCAG 2388 0.4778 MTQPSAPPPPPPPSLSPPPPPPTLTPTTPPPPQPAESVRVRCAGCRMILTVAPGLTEFACPTCRMPQMLPPELMPRAATTAAAPVPPTSAPASQPAHAPAHGIDPTKIQLPCASCKAILNVPHGLARFACPQCGVDLAVDVSKVKQFFPAAPPAEEVNEVAVEVERDEDEGGMAGETFTDYRPPKVSIGPPHPDPVVETSSLSAVQPPEPTYDPKVKDELESSKALSCLQIETLVYACQRHLQHLPNGARAGFFIGDGAGVGKGRTIAGLIWENWHHRRRKALWISVGSDLKFDARRDLDDVGATSVEVHALNKLPYSKLDSKSVGIREGVLFSTYNSLIASSEKGRSRLQQLVQWCGPGFDGLIIFDECHKAKNLVPEAGSQPTRTGEAVLDIQICYLWHFAIFSIEIVGTKCGLSYCCLISQDRLPEARVVYCSATGASEPRNMGYMVRLGLWGSGTSFSDFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYEGAEFEVIEAPLEDKMMEMYKKAAEFWAELRVELLSASAFLNDKPNSSHLWRLYWASHQRFFRHMCMSAKVPASVRLAKQALVKEKCVVIGLQSTGEARTEEAVTKYGSELDDFVSGPRELLLKFVEENYPLPEKPELLPGEDGVKELQRKRHSANPDVSVKGRVRKVPKWQPPSDAESDEESETDSAIESTDSDDEFQICEICTSEEERKKLLQCSCCGKLVHSTCLMPPIGDIVPEEWSCHLCKEKTDEYLQARQAYIAELQKRYDAALERKTKILEIIRSLDLPNNPLDDIIDQ 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8062g00017 796 PRINTS Proline rich extensin signature 1 13 - -
Mupr8062g00017 796 PRINTS Proline rich extensin signature 13 34 - -
Mupr8062g00017 796 PRINTS Proline rich extensin signature 66 91 - -
Mupr8062g00017 796 MobiDBLite consensus disorder prediction 167 216 - -
Mupr8062g00017 796 MobiDBLite consensus disorder prediction 1 37 - -
Mupr8062g00017 796 MobiDBLite consensus disorder prediction 646 693 - -
Mupr8062g00017 796 Pfam PHD-finger 699 747 IPR019787 -
Mupr8062g00017 796 MobiDBLite consensus disorder prediction 646 676 - -
Mupr8062g00017 796 MobiDBLite consensus disorder prediction 677 693 - -
Mupr8062g00017 796 ProSitePatterns Zinc finger PHD-type signature. 700 744 IPR019786 -
Mupr8062g00017 796 Gene3D - 219 400 IPR027417 -
Mupr8062g00017 796 Pfam P-loop containing NTP hydrolase pore-1 191 520 IPR039187 -
Mupr8062g00017 796 SMART PHD_3 699 745 IPR001965 -
Mupr8062g00017 796 PANTHER STRAWBERRY NOTCH-RELATED 33 796 IPR026741 GO:0006355
Mupr8062g00017 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 683 769 IPR013083 -
Mupr8062g00017 796 MobiDBLite consensus disorder prediction 78 101 - -
Mupr8062g00017 796 MobiDBLite consensus disorder prediction 1 36 - -
Mupr8062g00017 796 SUPERFAMILY FYVE/PHD zinc finger 691 750 IPR011011 -
Mupr8062g00017 796 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 463 IPR027417 -
Mupr8062g00017 796 ProSiteProfiles Zinc finger PHD-type profile. 697 747 IPR019787 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr8062g00017 AAA_34 2.8e-129 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8062g00017 K26273 - gmx:100808670 1321.99