Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8058g00002 ATGCCTCTCTCGCCGGACCCTTCCGCCGCCGCTGACTTCCTCTGCGCCGAAGACGCCAGCGAAGTCACCTCTGACCACCAATCGCCGCCGATCCCGGAATCCCTCTCGGCGGATTACGACGAGTCAGCGATCGGCGGACTCCTGGATGCGGAGAGCCACCACATGCCGGAAAAAGACTATCTCCGGCGATGCCGAGACCGTTCAGTGGACGTGACTGCACGGTTGGACGCCGTGAACTGGATCTTAAAGGTCCATGCGTTCTACCAGTTTCGCCCCGTAACGGCGTTTCTCTGCGTCAACTATTTGGACCGTTTCCTCTCGTGCTGTACTCTTCCGCGAGCTAGTGGGTGGGCGTTTCAGCTACTATCAGTGGCATGTTTGTCTCTAGCAGCGAAAATGGAGGAGCCCCATGTGCCCTTTTTATTGGACCTGCAATTGTTCGAGCCCAAGTTCTTTTTTGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGGTCATGGCCAATCTCAAATGGAGACTCAGTTCTGTCACACCCTTTCATTATCTTCATTATTTCATCTCCAAGCTCCCTTCCTCTTCTGATTCCGTCAACCACTTCTTCTCCACAGCCTCCAACCTCATTCTCAGCACCACTCGCGTGCTTGATTTCTTGGGCTTTGCGCCTTCCTCCTTGGCAGCCGCCGCCGTTCTCTGCTCAGCCGGCCGTGACCTTGTTTCCGCCAACGGACAATTCACGCTCACTTTTCACGACAGAGTAAATAAAGAAATGGTGAGATGCTGTCACCAACTAATGGAAGAGTACGTGGTGGACACGTGTCCCGCATCTAGTTCTACCATTAAAGCCAGCATAGCCGAGCCGCCGCCGCCGCCCTCCAGCCCCGTCGGCGTGCTCGACGCCGCCACCTGTGGGAGCTGTGACACGCCTTCCGAGAGGAATTGCGCCGGCTCAAGCCAGGAACAAGCCGAGCCGCCAAGTAAGCGGCTCCGATCCTCTACTCCGGATGCACCGCAGCGGTAG 1017 0.5654 MPLSPDPSAAADFLCAEDASEVTSDHQSPPIPESLSADYDESAIGGLLDAESHHMPEKDYLRRCRDRSVDVTARLDAVNWILKVHAFYQFRPVTAFLCVNYLDRFLSCCTLPRASGWAFQLLSVACLSLAAKMEEPHVPFLLDLQLFEPKFFFEPKTVQRMELWVMANLKWRLSSVTPFHYLHYFISKLPSSSDSVNHFFSTASNLILSTTRVLDFLGFAPSSLAAAAVLCSAGRDLVSANGQFTLTFHDRVNKEMVRCCHQLMEEYVVDTCPASSSTIKASIAEPPPPPSSPVGVLDAATCGSCDTPSERNCAGSSQEQAEPPSKRLRSSTPDAPQR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8058g00002 338 Gene3D - 47 262 - -
Mupr8058g00002 338 CDD CYCLIN_AtCycD-like_rpt2 176 264 - -
Mupr8058g00002 338 SMART Cyclin_C_2 176 305 IPR004367 -
Mupr8058g00002 338 CDD CYCLIN_AtCycD-like_rpt1 73 171 - -
Mupr8058g00002 338 SUPERFAMILY Cyclin-like 36 173 IPR036915 -
Mupr8058g00002 338 FunFam D2/4-type cyclin 57 170 - -
Mupr8058g00002 338 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Mupr8058g00002 338 Pfam Cyclin, N-terminal domain 49 174 IPR006671 -
Mupr8058g00002 338 MobiDBLite consensus disorder prediction 306 338 - -
Mupr8058g00002 338 Gene3D - 57 174 - -
Mupr8058g00002 338 FunFam D6-type cyclin 171 262 - -
Mupr8058g00002 338 Pfam Cyclin, C-terminal domain 176 271 IPR004367 -
Mupr8058g00002 338 SMART cyclin_7 79 167 IPR013763 -
Mupr8058g00002 338 PANTHER CYCLINS 37 269 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8058g00002 Mupr-Chr8058 32144 33637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8058g00002 12 271 Core Cell Cycle Gene Families AT1G70210 43.774 1.71e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8058g00002 K18810 - gmx:100776178 502.671