Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8055g00002 ATGATAAGGGGAGACAACATCGAGCATCACCTGTTTCTTATTGTTTGTCTCTCAGGAAAGTGCATTCCCAACATAACAGAGATGGTCAGAACTCCTTCTCGTGACACAAGTGGACTTCAGAAAGGCACTTGGACACCAGAGGAGGATCGCAAGTTAATTGCTTACATCACTCGCTATGGCACTTGGAATTGGCGCCAACTCCCAAAATTTGCAGGTCTGGCAAGGTGTGGAAAGAGCTGCAGACTTAGGTGGCTCAATTATCTCAGGCCCGACATAAAAAGAGGGAACTATACTGAAGAAGAAGAAGAGATTATAATCAAACTGCACGAAAAGCTGGGTAACAAATGGTCTGTCATTGCCACTCATTTACCTGGAAGAACAGATAACGAAATAAAGAACCACTGGCACACCACACTCAAAAAGCGTTTGGGAAAGAACGAAGTTCCCACCAATGAAAATGTGAAAGCCACGAAATCAAATAGTTCTGGGTCCGAACAAGACACGGACTCGATTCAGAACAATGGTTCCTTTCACGGTTTATCTCCAACAACCTCTAAAGTCTCCGACTCTGACCCTTTATCCCCTCACGTATCCTCAAGCGAATTCTCGTCCTCAACCTCGGATTATACCACAGCTGCCACTAATGAAAATTTGTTAGGGGAAGATGGGTTCCATTTTGTGAACGAGAATCTTTGGGCAGAGTCATACGTAGATAAGATTTTCCACGCCCCAATACAAGACAGTGATAAAGGTGATCATTTTCATGGTTTAGATGCTGCAGGGGCCATGCACCCTTGGGCATTGTTGGAGTGTCCTCTTTCATCATGTAACGAAAATATGGTTATGGACAACGAACACTTTGGGTTTCTAGAAGCAATAGAACCAACGAGTGGTAGTTTTTGGACAGAGCCGTATGTGACTGACATATCCCCCGTTCAAAACGAATTACTTGTGCCTTTTCCATTGGTGAATGAATCCGTGGAATACTTCTCTTCCATGTATGATGCGGACCTTTGGTGTCAGAACAATTCTCATGATTTACACGGCAGCCTATTCCAATGA 1062 0.4397 MIRGDNIEHHLFLIVCLSGKCIPNITEMVRTPSRDTSGLQKGTWTPEEDRKLIAYITRYGTWNWRQLPKFAGLARCGKSCRLRWLNYLRPDIKRGNYTEEEEEIIIKLHEKLGNKWSVIATHLPGRTDNEIKNHWHTTLKKRLGKNEVPTNENVKATKSNSSGSEQDTDSIQNNGSFHGLSPTTSKVSDSDPLSPHVSSSEFSSSTSDYTTAATNENLLGEDGFHFVNENLWAESYVDKIFHAPIQDSDKGDHFHGLDAAGAMHPWALLECPLSSCNENMVMDNEHFGFLEAIEPTSGSFWTEPYVTDISPVQNELLVPFPLVNESVEYFSSMYDADLWCQNNSHDLHGSLFQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8055g00002 353 Pfam Myb-like DNA-binding domain 94 138 IPR001005 -
Mupr8055g00002 353 Pfam Myb-like DNA-binding domain 41 88 IPR001005 -
Mupr8055g00002 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 28 214 - -
Mupr8055g00002 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 143 IPR017930 -
Mupr8055g00002 353 MobiDBLite consensus disorder prediction 150 208 - -
Mupr8055g00002 353 Gene3D - 41 93 - -
Mupr8055g00002 353 SMART sant 40 90 IPR001005 -
Mupr8055g00002 353 SMART sant 93 141 IPR001005 -
Mupr8055g00002 353 CDD SANT 43 88 IPR001005 -
Mupr8055g00002 353 Gene3D - 96 171 - -
Mupr8055g00002 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 88 IPR017930 -
Mupr8055g00002 353 FunFam MYB-related transcription factor 40 93 - -
Mupr8055g00002 353 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Mupr8055g00002 353 MobiDBLite consensus disorder prediction 138 208 - -
Mupr8055g00002 353 ProSiteProfiles Myb-like domain profile. 36 88 IPR001005 -
Mupr8055g00002 353 SUPERFAMILY Homeodomain-like 39 135 IPR009057 -
Mupr8055g00002 353 CDD SANT 107 139 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8055g00002 Mupr-Chr8055 13260 14758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8055g00002 28 234 MYB Transcription Factor Family AT2G31180 46.890 2.57e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr8055g00002 Myb_DNA-binding 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8055g00002 K09422 - gmx:100811124 402.519