Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8055g00001 ATGGATTTTGACCTAGAGAACCCTCTCGGAAACTTCCACGACCTTCCCTGCGATGCTGTCCCTTCCCTCTTCCTCATCGAATCCGACCACATCCCTCCGCCAAATTACTGTCAGAACCTCAAAGCCAGCGACTTCGACATCTCTGTTAGAAGAAATGTCGTCTCTTTGATCTCACAGTTGTCCTGCACCGTCGATCCAGTTCTACCTTACTTAGCTATCAACTATTTGGATCGCTTCCTCGCTAACCAAGGGATATTGCAACCAAAGCCATGGGCAAACAAGCTTCTTGCAGTCTCGTGCTTTTCTCTAGCTGCCAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTCCAGATTCTACTGAATCATGGTGATGGCGGTGCCATTTTTGAGACACAAACAATTCAAAGAATGGAAGGCCTTGTCTTGGGGGCACTCCAGTGGCGAATGCGTTCGATTACCCCTTTCTCTTTCGTTCCCTTCTTCGTGAATTTGTTCAGGCTCAGAGACCCGGCATTGAGGCAGGTTCTGAAGGATAGAGCGTCTGAAATTATACTCAAGTCACAAAGGGAGATAAAGGTCTTGGAATTCAAGCCATCTATAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCCTGCTTCTTGAGAGCAATATCCGATTGCTCATTTGTTAATAAAGAAACTGTGGGGCAGTGTTATAATGTGATACAAGAGATAGCCAGGGAGGAGTACGAATCTGTGTTCAATATAAATTCAACTTCAGACACACCGGTTAATGTGTTAGACGAACATTTTGTGAGCTTAGAAAGTGAAAAAACCAATGGAACCAACGTTGCTCCCGCTGTGATACAAGAGCAGGACTTCAAAAGAAGGAAAATCACCGATTATGGCAACAAACGCACGGTCCCGTTTTCTCATTTTCATCAATGCTGA 957 0.4504 MDFDLENPLGNFHDLPCDAVPSLFLIESDHIPPPNYCQNLKASDFDISVRRNVVSLISQLSCTVDPVLPYLAINYLDRFLANQGILQPKPWANKLLAVSCFSLAAKMLKTEYSATDVQILLNHGDGGAIFETQTIQRMEGLVLGALQWRMRSITPFSFVPFFVNLFRLRDPALRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSFVNKETVGQCYNVIQEIAREEYESVFNINSTSDTPVNVLDEHFVSLESEKTNGTNVAPAVIQEQDFKRRKITDYGNKRTVPFSHFHQC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8055g00001 318 CDD CYCLIN_AtCycD-like_rpt2 153 244 - -
Mupr8055g00001 318 SMART Cyclin_C_2 153 280 IPR004367 -
Mupr8055g00001 318 FunFam D6-type cyclin 149 242 - -
Mupr8055g00001 318 SUPERFAMILY Cyclin-like 135 249 IPR036915 -
Mupr8055g00001 318 Gene3D - 33 151 - -
Mupr8055g00001 318 Pfam Cyclin, N-terminal domain 28 150 IPR006671 -
Mupr8055g00001 318 SUPERFAMILY Cyclin-like 13 150 IPR036915 -
Mupr8055g00001 318 PANTHER CYCLINS 34 254 IPR039361 -
Mupr8055g00001 318 SMART cyclin_7 51 144 IPR013763 -
Mupr8055g00001 318 SMART cyclin_7 157 246 IPR013763 -
Mupr8055g00001 318 FunFam D6-type cyclin 33 148 - -
Mupr8055g00001 318 Gene3D - 23 242 - -
Mupr8055g00001 318 Pfam Cyclin, C-terminal domain 153 260 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8055g00001 Mupr-Chr8055 1178 3066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8055g00001 1 299 Core Cell Cycle Gene Families AT4G03270 43.131 4.16e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8055g00001 K18812 - gmx:100799951 602.438