Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8052g00001 GCCGATTCTCCCCTCGCAAGGAATTCAAGGTCCCCTCCCCCATGGAAAGCTCAGTCGAGGTCTAGGTCTAGGTCGAGGTCTAGGTCAAGATCTAGGTCTAGGCCTAGACAGAGGCCAAGATCCCGTTCTAGAAGTCGTGGCAGGTCAAGATCACGAAGTCATGGAAGGGCCGAGTCTTCAAATCCTGGTGACACACTTTATGTAACTGGTCTGTCTTCGAGGGTCACCGAAAGAGACCTAGAGGAACACTTCTCCAAGGAAGGAAAGGTTTCTTCATGTTTTCTTGTGGTGGAGCCCCGTACACGGATTTCTCGTGGTTTTGCTTTTGTTACAATGGAATCTTCTGAAGATGCAGAGCGCTGTATCAAGTATCTCAATCAATCAGTTTTAGAGGGTCGTTACATCACTGTTGAGCGGTCACGAAGAAAACGTGCAAGAACTCCAACACCAGGGCACTATCTCGGACTGAAAAACACAAGAGACTATGGTTATCGTGGTGAGCGGGGAAGGTATCGTGATGGTCCGGACCGTGATGACCGGGGAAGGTATCGTGATGGTCCTGACCGTGATGATTATTCACGTCGCAGGTCTCCAAGGCATTCACCATACAGAGGTGGCCAAGATTATTCACCCCGGCGCTCACCCTATGGGGGAAGGTCCAGGAGGGATAGGTCTAGGTCGCTTCCTTATTCTCCACATGGTAGCCCAGACAGGAAGTATGCTCGTGGATCTAGGGGAAGCAAAAATTTGTTGACTAATTATGGTGCTGTGATGAACTACGAAAACTAA 789 0.4968 ADSPLARNSRSPPPWKAQSRSRSRSRSRSRSRSRPRQRPRSRSRSRGRSRSRSHGRAESSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESSEDAERCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKNTRDYGYRGERGRYRDGPDRDDRGRYRDGPDRDDYSRRRSPRHSPYRGGQDYSPRRSPYGGRSRRDRSRSLPYSPHGSPDRKYARGSRGSKNLLTNYGAVMNYEN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8052g00001 262 MobiDBLite consensus disorder prediction 1 69 - -
Mupr8052g00001 262 MobiDBLite consensus disorder prediction 1 20 - -
Mupr8052g00001 262 MobiDBLite consensus disorder prediction 161 202 - -
Mupr8052g00001 262 MobiDBLite consensus disorder prediction 140 247 - -
Mupr8052g00001 262 CDD RRM_SF 66 138 - -
Mupr8052g00001 262 SUPERFAMILY RNA-binding domain, RBD 59 173 IPR035979 GO:0003676
Mupr8052g00001 262 SMART rrm1_1 65 138 IPR000504 GO:0003723
Mupr8052g00001 262 MobiDBLite consensus disorder prediction 21 51 - -
Mupr8052g00001 262 Gene3D - 9 148 IPR012677 -
Mupr8052g00001 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66 135 IPR000504 GO:0003723
Mupr8052g00001 262 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 148 - -
Mupr8052g00001 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 64 142 IPR000504 GO:0003723
Mupr8052g00001 262 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 58 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8052g00001 Mupr-Chr8052 1613 5563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8052g00001 37 146 Eukaryotic Initiation Factors Gene Family AT1G49760 30.000 1.11e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8052g00001 K12897 - gmx:100800398 281.952