Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8039g00001 CAATCTTCACAACAGAAATTAGAGGACCATAACTCAAAGGGGACATGTACTAACGTGCGCCACTGGGACCTATATATATTCCCTTCACCTAAAATTTTAATTAAAACCGAAACAAGCCAACCCCATTTTTTTCTGAACTCAGAAGCAGTGATCCATTGGTTTCTTCTCTCTAACAACATGGACAATGGTTGCTTCCCTTCACGCCACGATGCTTTTCCAGCTGGTCTGCGAGTTCTCGTTGTTGATGATGATCCAACGTGGTTGAGGATCCTTGAAAAGATGCTCAAGAAGTGCTTGTATGAAGTGACAACATGTTGTTTAGCAACAGAGGCTCTGAAAAAACTTCGTGAAAGGAAAGATGCATATGACATAGTGATCAGCGATGTGAACATGCCTGACATGGATGGCTTCAAACTTCTTGAGCAAGTTGGACTGGAGATGGATCTTCCTGTCATTATGATGTCAGTTGATGGAGAAACAAGTAGGGTGATGAAAGGTGTTCAACATGGAGCGTGTGATTATCTCCTCAAGCCTATAAGGATGAAAGAACTGCGGAATATATGGCAACATGTCTTTAGAAAAAGGATGCACGAAGCAAGAGAATTTGAAAGTTATGACGGTTTTGATGGCATTCACTTAATGAGAAATGGATCAGATCAGTCTGATGATTGTAACCTGTTTGCTGTAGAAGAAATTACCTCAATGAAGAAAAGGAAAGATGCAGATAGCAAACATGATGACAGAGAATTTGAAGATCATTCTCCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTAGATCTTCATCAGAAGTTTGTCAAAGCAGTAAATCAAATTGGATTTGATAAAGTTGGTCCGAAGAAAATTCTAGATTTGATGAATGTTCCGTGGTTGACTAGAGAAAATGTTGCTAGTCACTTACAGAAGTACAGGCTCTACTTGAGTAGGTTGCAAAAGGAAAATGATCAGAAATCTTCCTCAAGTGGAATAAAGCATTCAGATTCACCTTCAAAAGATCCAGGAAGTTTTAGTTTTCTAAACACTGCAAACAAGCAACAAAATGATGATGGCATTGACAGCTTCAGTTATTCAGATGGAACTTTACTACTTCAGATGGATGCTACAAGTCATGAAGGTGATCTCAAGGGAATTGTGTCAGAGCCTATGACCGAAAAAAGAAGAACTTCCACTAGTGACATTCCTGACCCAAAGATACAAAAAATTTCACAGATGAGCCTCAATCAACATTTTGCACCTGTAGAGTCATCAGAAGCAAACCATGCAGTATTTGATTGCACCATACCAGCACAGTACTCTTGGAGTGAGTTTCCAAAAGGGCCACTCAAAGAAGAACAAAAGACACTTGTTCACTTAGAAGATAGCTTCAACCAGTTACCATTACATGGTACACAGCATCACATTCAGGTTGATCAATCACAATCAATATCTTCAATTAATTCCAATCCTTCTATAGCAGAAGAAGAGGTTGCTGCCAGCTTAGAGACCAAACCTTTGTATGCTGATTACAAGAGCGACTATTTGAGTCCCGTGAGTTCAATAGGATCTGCAGTTGAAGCCTTTCCTAATCAGTCCAAAAGCCTTATGGTTAATGATCCATCTTCAGAGCCCAATTTCACCTCCAATTTGGGCTTGAAGACTCAGGGATTTAATCATGGTTGCATTTCTGATCTGGATTTGTACCAAAGAAACCTGTTATTGGGTGGTGAGGCAGCTTCTGCAGCTCTGGAGGAGGACTTGAATTTCTTTTTGCTACAAGGTGATTGCTACAACATGAATTTCGGCCTGCAGAATATAGATATGTCAGAATATTATGATCCAAGGTTTATGGCTGAAGTTCCTACTCACTTTTATGATTCAGCAGATTATTCATCGGTAGATCAAGGTCTATTCATAGCA 1914 0.3971 QSSQQKLEDHNSKGTCTNVRHWDLYIFPSPKILIKTETSQPHFFLNSEAVIHWFLLSNNMDNGCFPSRHDAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMHEAREFESYDGFDGIHLMRNGSDQSDDCNLFAVEEITSMKKRKDADSKHDDREFEDHSPTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKDPGSFSFLNTANKQQNDDGIDSFSYSDGTLLLQMDATSHEGDLKGIVSEPMTEKRRTSTSDIPDPKIQKISQMSLNQHFAPVESSEANHAVFDCTIPAQYSWSEFPKGPLKEEQKTLVHLEDSFNQLPLHGTQHHIQVDQSQSISSINSNPSIAEEEVAASLETKPLYADYKSDYLSPVSSIGSAVEAFPNQSKSLMVNDPSSEPNFTSNLGLKTQGFNHGCISDLDLYQRNLLLGGEAASAALEEDLNFFLLQGDCYNMNFGLQNIDMSEYYDPRFMAEVPTHFYDSADYSSVDQGLFIA 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8039g00001 638 SMART REC_2 76 188 IPR001789 GO:0000160
Mupr8039g00001 638 MobiDBLite consensus disorder prediction 383 399 - -
Mupr8039g00001 638 Pfam Myb-like DNA-binding domain 260 310 IPR001005 -
Mupr8039g00001 638 PANTHER TWO-COMPONENT RESPONSE REGULATOR 76 359 IPR045279 GO:0009736
Mupr8039g00001 638 MobiDBLite consensus disorder prediction 378 401 - -
Mupr8039g00001 638 NCBIfam myb-like DNA-binding domain, SHAQKYF class 258 311 IPR006447 GO:0003677
Mupr8039g00001 638 ProSiteProfiles Response regulatory domain profile. 77 192 IPR001789 GO:0000160
Mupr8039g00001 638 Gene3D - 255 317 - -
Mupr8039g00001 638 Gene3D - 76 248 - -
Mupr8039g00001 638 SUPERFAMILY CheY-like 75 200 IPR011006 -
Mupr8039g00001 638 FunFam Two-component response regulator 254 317 - -
Mupr8039g00001 638 SUPERFAMILY Homeodomain-like 256 315 IPR009057 -
Mupr8039g00001 638 CDD REC_typeB_ARR-like 78 192 - -
Mupr8039g00001 638 MobiDBLite consensus disorder prediction 320 350 - -
Mupr8039g00001 638 Pfam Response regulator receiver domain 78 187 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8039g00001 Mupr-Chr8039 13074 17518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8039g00001 70 324 Response Regulator Gene Family AT2G25180 55.985 2.85e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr8039g00001 Response_reg 1.5e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8039g00001 K14491 - gmx:100778324 1004.2