Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8028g00001 ATGGCCATCCTCAGCAAAAAGAAAAGCGTAGGTGGCATTGTGAAGTTCAAATTCGTCGTTGAAAAGCTCCACAAGAGACTCTTACTGGGGAGAAACAAAGAAGGGTGTGAGTCAACGTACGTGCCAGAGGACGTGAAGGAAGGACACTTCGCGGTCATTGCTCAAGGTGGAGAGGATCAAAAGAGATTCGTTCTGCCACTAAGCTGTTTAACAAACCCAACGTTTGTGAAGCTGTTGGAGCAAGCAGAAGAAGAGTATGGTTTTGACCATGAAGGTGCAGTGACCATTCCTTGCAGGCCTAGTGAGCTTGAGAGGATTCTCACGCAGCAATGGCATCATGAGGGAACTCAAACCACTGGACTAAGGTGGACTTGTAAAAAATCCATGGTATTTTAA 396 0.4621 MAILSKKKSVGGIVKFKFVVEKLHKRLLLGRNKEGCESTYVPEDVKEGHFAVIAQGGEDQKRFVLPLSCLTNPTFVKLLEQAEEEYGFDHEGAVTIPCRPSELERILTQQWHHEGTQTTGLRWTCKKSMVF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8028g00001 131 Pfam Auxin responsive protein 33 107 IPR003676 GO:0009733
Mupr8028g00001 131 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8028g00001 Mupr-Chr8028 3069 3464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8028g00001 18 98 Calmodulin-binding Proteins AT5G20810 43.529 1.93e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8028g00001 - K14488 gmx:102668167 213.772