Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8016g00003 ATGACTCGTCCACCACCCACACCTCCTGTACATGCCAATATATCAGACCGAGGTTCATTTTCCGGGATCTTGGCCATGGAAGTGGAACCAAAGGAGAGAAAGAAGGAAGACGGAACACAGCAGGAACGAAAGGTTCCATTCCTCAAGCTCTTCTCCTTTGCTGACTCCTACGATTGTGTTTTGATGGCTGTTGGATCTGTTGGGGCATGTGTTCATGGTGCCTCTGTGCCTGTTTTCTTTGTCTTCTTTGGAAAGATTATCAATGTCATAGGCTTCGCTTACCTTTTTCCCAAAGAAGCTTCCCACGAAGTTGCCAAGTATGCTTTGGATTTTGTGTATCTAAGCATAGCAATATTCTTTTCATCTTGGACAGAGGTGGCATGTTGGATGCATACTGGAGAACGTCAAGCTGCAAAGATGAGGATAGCATACTTAAGGTCAATGTTGAATCAAGATATAAGTCTTTTTGATACCGAGGCATCAACCGGAGAGGTTATTTCTTCTATTACAAGTGACATCATCGTTGTTCAAGATGCACTGTCTGAGAAGGTCTTCTCCTCCTTGGTTGTTCTTCATTATCTCCCTCCTTCTCAAATTGGCTTTCACCTCCTTTAA 615 0.4358 MTRPPPTPPVHANISDRGSFSGILAMEVEPKERKKEDGTQQERKVPFLKLFSFADSYDCVLMAVGSVGACVHGASVPVFFVFFGKIINVIGFAYLFPKEASHEVAKYALDFVYLSIAIFFSSWTEVACWMHTGERQAAKMRIAYLRSMLNQDISLFDTEASTGEVISSITSDIIVVQDALSEKVFSSLVVLHYLPPSQIGFHLL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8016g00003 204 Pfam ABC transporter transmembrane region 67 186 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8016g00003 204 Gene3D ABC transporter type 1, transmembrane domain 40 191 IPR036640 GO:0005524|GO:0016020
Mupr8016g00003 204 SUPERFAMILY ABC transporter transmembrane region 50 189 IPR036640 GO:0005524|GO:0016020
Mupr8016g00003 204 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 63 191 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8016g00003 204 PANTHER ABC TRANSPORTER B FAMILY 30 185 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8016g00003 Mupr-Chr8016 25727 31035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8016g00003 5 201 Calmodulin-binding Proteins AT2G36910 43.655 6.02e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8016g00003 K05658 - gmx:100809752 278.485