Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8016g00001 ATGATAGAGAGGGACACAGTGAGCAAAAGTAGCTCAAAAACTGGTCGCAAGTTAGGCAAATTGGAGGGTCATATCCAGTTTAAGAATGTGTGTTTCAGTTATCCATCTCGTCCAGATGTATCAATATTCAACAACCTGTGTCTTGACATTCCTTCAGGGAAAATTGTAGCCCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACTGTCGTATCATTGATTGAACGCTTTTATGAACCACTTTCTGGTCAGATACTACTAGACAGGAATGATATCAGGGAACTTGATCTCAAATGGCTCAGGCAGCAAATTGGGCTGGTTAATCAGGAACCTGCCCTTTTTGCTACAAGCATCAAAGAGAACATACTTTATGGAAAAGATAATGCCACTCTTGAAGAACTAAAACGTGCTGTGAAGCTTTCAGATGCTCAATCTTTCATTAACAATCTTCCTGATAGACTAGATACTCAGGTTGGTGAGAGAGGAATACAATTATCAGGGGGACAGAAACAAAGGATTGCAATATCTCGTGCAATCGTGAAGAATCCATCAATTCTTTTGTTGGATGAAGCAACGAGTGCTCTGGATGCTGAGTCTGAGAAGAGTGTACAGGAGGCTCTTGATCGTGTCATGGTTGGGAGAACAACTGTTATAGTGGCACACAGGCTCTCTACCATTAGGAATGCAGATGTGATTGCTGTTATGCAAGGAGGCAAGATTGTGGAAACTGGCAATCATGAGGAACTCATATCCAACCCAAATAATGTATATGCATCTCTTGTTCAAATCCAAGAAACAGCCTTTTCTCGAGGCCATCTCTCTGTGGATCCTTACTTGGGAGGGTCATCAAGGCGCCTAGGAGAGTCATCATCCCGCACCACAAGCTTTCGTGGTAGTTTCCGTTCAGACAAAGAATCTACTAGCCGGGCTTTTGGTGATGGAGCAGAAAGTGTTGGAAGTTCAAGGCAGGTCTCAGTAAGAAGACTGTATTCTATGATTGGTCCTGACTGGTTTTATGGAGTTTTTGGGACCTTATGTGCATTTATTGCTGGAGCACAGATGCCACTTTTTGCACTTGGAATTTCTCATGCACTTGTATCATACTATATGGACTGGGACACAACATGTCGTGAAGTAAAAAAAATTGCTTTTCTCTTCTGTGGAGCAGCAGTTATAACTGTCACTGTCCATGCCATTGAACATCTTTCTTTTGGAATCATGGGAGAACGACTTACCCTTCGTGTGAGAGAAAAAATATTTGCTGCTATTTTGAAGAGTGAAATTGGCTGGTTTGATGACATAAACAACACAAGTTCTATGCTTTCGTCACGTTTAGAGACTGATGCAACATTTTTAAGAACTATAGTTGTTGATCGTTCAACGATTCTTCTGCAGAATGTTGGTCTGGTTGTTGCTTCATTTGTTATTGCCTTCATGTTGAACTGGAGGATGACGCTTGTTGTATTGGCCACATACCCTTTGATCATTAGTGGTCACATTAGCGAGAAACTATTCATGCAAGGCTTTGGTGGCAACCTGAGCAAAGCATATCTAAAAGCCAACATGTTGGCCGGGGAGGCTGTGAGTAATATACGCACTGTGGCTTCATTTTGTTCTGAACAAAAGGTCCTTGACCTTTATGCCAATGAGCTTGTGGAGCCTTCCAAGCGTTCATTCAATCGTGGCCAAATTGCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTATGGATCTGTGTTGATGGAAAAGGAGCTTTCTAGCTTCAAATCAATTATGAAGTCATTTATGGTTTTAATTGTAACAGCACTGGCTATGGGGGAGACTTTGGCACTGGCACCTGACCTTTTGAAAGGAAATCAAATGGTAGCATCAATATTTGAAGTGATGGATAGAAAGACGGGAATATTGGGTGATGTTGGAGAAGAGCTGAAGACAGTAGAAGGAGAAATTGAGCTAAAAAGAATCAATTTCAGCTACCCTTCAAGGCCAGACGTGGTTATTTTTAATGATTTCAATCTTAAAGTGCCTGCAGGAAAGAATATTGCGTTGGTGGGGCATAGTGGTTGTGGTAAAAGCTCAGTCATCTCCCTTATACTCAGATTTTATGATCCAACATCTGGGACGGTGATGATTGATGGAAAAGACATCAAGAAACTCAATTTGAAATCGCTTAGGAAGCATATTGGTCTAGTGCAACAAGAACCGGCTCTTTTTGCAACATCAATTTATGAAAATATTGTTTATGGAAAGGAAGGAGGGTCAGAAGCAGAAGTGATTGAAGCAGCTAAACTTGCCAACGCTCATGGCTTTATCAGTGCTCTTCCTGAGGGATACTCCACAAAAGTAGGTGAGAGAGGGGTTCAACTGTCTGGTGGCCAGAAACAAAGGGTAGCTATTGCCAGGGCTGTTTTGAAAAACCCCGAAATCTTGCTGCTAGATGAAGCCACTAGTGCACTGGATTTGGAGTCAGAACGTCTAGTGCAACAAGCTCTAGACAAATTGATGCAGAACAGAACAACAGTTGTAGTGGCTCATAGGCTATCCACAATAAGAAATGCAGACCAAATAGCAGTTTTAGAGGATGGAAAGATAATTGAGCGAGGGACTCATTCAAGACTTGTACTGAACACTGATGGAGCATACTACAAACTAGTTAGCCTTCAACAACAACAGCATGTACAAGAACATATTGAT 2718 0.418 MIERDTVSKSSSKTGRKLGKLEGHIQFKNVCFSYPSRPDVSIFNNLCLDIPSGKIVALVGGSGSGKSTVVSLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSIKENILYGKDNATLEELKRAVKLSDAQSFINNLPDRLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADVIAVMQGGKIVETGNHEELISNPNNVYASLVQIQETAFSRGHLSVDPYLGGSSRRLGESSSRTTSFRGSFRSDKESTSRAFGDGAESVGSSRQVSVRRLYSMIGPDWFYGVFGTLCAFIAGAQMPLFALGISHALVSYYMDWDTTCREVKKIAFLFCGAAVITVTVHAIEHLSFGIMGERLTLRVREKIFAAILKSEIGWFDDINNTSSMLSSRLETDATFLRTIVVDRSTILLQNVGLVVASFVIAFMLNWRMTLVVLATYPLIISGHISEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVASFCSEQKVLDLYANELVEPSKRSFNRGQIAGIFYGISQFFIFSSYGLALYGSVLMEKELSSFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASIFEVMDRKTGILGDVGEELKTVEGEIELKRINFSYPSRPDVVIFNDFNLKVPAGKNIALVGHSGCGKSSVISLILRFYDPTSGTVMIDGKDIKKLNLKSLRKHIGLVQQEPALFATSIYENIVYGKEGGSEAEVIEAAKLANAHGFISALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDLESERLVQQALDKLMQNRTTVVVAHRLSTIRNADQIAVLEDGKIIERGTHSRLVLNTDGAYYKLVSLQQQQHVQEHID 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8016g00001 906 Gene3D ABC transporter type 1, transmembrane domain 1 266 IPR036640 GO:0005524|GO:0016020
Mupr8016g00001 906 FunFam ABC transporter B family member 4 648 902 - -
Mupr8016g00001 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 263 IPR027417 -
Mupr8016g00001 906 FunFam ABC transporter B family member 4 15 269 - -
Mupr8016g00001 906 SMART AAA_5 52 238 IPR003593 GO:0016887
Mupr8016g00001 906 SMART AAA_5 685 871 IPR003593 GO:0016887
Mupr8016g00001 906 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 658 894 IPR003439 GO:0005524
Mupr8016g00001 906 CDD ABC_MTABC3_MDL1_MDL2 25 263 - -
Mupr8016g00001 906 FunFam ABC transporter B family member 1 319 626 - -
Mupr8016g00001 906 CDD ABC_MTABC3_MDL1_MDL2 658 896 - -
Mupr8016g00001 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 652 896 IPR027417 -
Mupr8016g00001 906 PANTHER ABC TRANSPORTER B FAMILY 313 895 IPR039421 -
Mupr8016g00001 906 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 261 IPR003439 GO:0005524
Mupr8016g00001 906 Gene3D - 15 264 IPR027417 -
Mupr8016g00001 906 ProSitePatterns ABC transporters family signature. 797 811 IPR017871 GO:0005524|GO:0016887
Mupr8016g00001 906 CDD ABC_6TM_Pgp_ABCB1_D2_like 329 643 - -
Mupr8016g00001 906 Gene3D ABC transporter type 1, transmembrane domain 627 655 IPR036640 GO:0005524|GO:0016020
Mupr8016g00001 906 Gene3D - 656 901 IPR027417 -
Mupr8016g00001 906 SUPERFAMILY ABC transporter transmembrane region 326 639 IPR036640 GO:0005524|GO:0016020
Mupr8016g00001 906 Gene3D ABC transporter type 1, transmembrane domain 321 626 IPR036640 GO:0005524|GO:0016020
Mupr8016g00001 906 Pfam ABC transporter 677 825 IPR003439 GO:0005524
Mupr8016g00001 906 Pfam ABC transporter 44 192 IPR003439 GO:0005524
Mupr8016g00001 906 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524|GO:0016887
Mupr8016g00001 906 Pfam ABC transporter transmembrane region 341 611 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8016g00001 906 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 340 625 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr8016g00001 906 MobiDBLite consensus disorder prediction 282 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8016g00001 Mupr-Chr8016 2596 6863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8016g00001 1 902 Calmodulin-binding Proteins AT2G36910 51.919 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8016g00001 K05658 - gmx:100809752 1560.43