Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8011g00003 ATGCACATTCCATTCGCTTTATATATATTTAACAACCTCTTAATTTACTACTTCATACACAAAACCATTGATCTTTCAATTCACAAAATATTCTCAATCAAAAAAGTGAAACCGAAATTTCCTAACACTAGTTTGGTTTTTGATACCCTGCTTAGCGGAGAAATGGACAAAGAAGGTCTTGGACTTGAAATCACCGAGCTAAGGTTGGGGCTTCCTGGTGGGGACAAGAAGGAGAAGAAGAGGGTGTTCTCGGAGATTGAAGCTGATGGCGAGAACAGTTCCTCCGATGACCGGAAAATTCAAACCAAGAATCAAGTGGTGGGGTGGCCTCCGGTGTGTTCGTACCGGAAAAAGAACAGCGTCAATGAAACAAAAATGTACGTCAAAGTTAGCATGGACGGGGCTCCTTTCTTGCGTAAAATCGATTTGGGTATGCACAAGGGATATTCGGAGTTAGCCTTCGCCTTGGAGAAGTTCTTCGGTTGCTATGGAATTGGCGAAGCGTTTAAGGATGCGGACAATGCTGAACACGTTCCTATCTACGAGGACAAAGATGGTGACTGGATGCTGGTTGGAGATGTTCCTTGGGAGATGTTTATGGAGTCATGCAAGAGGTTGAGGATTATGAAGAGATCAGATGCAAAGGGCTTCGATCTGCAACCAAAAGGGTCTTTAAAGGGATTTATAGAAGGCGTGACAAAATGA 705 0.4326 MHIPFALYIFNNLLIYYFIHKTIDLSIHKIFSIKKVKPKFPNTSLVFDTLLSGEMDKEGLGLEITELRLGLPGGDKKEKKRVFSEIEADGENSSSDDRKIQTKNQVVGWPPVCSYRKKNSVNETKMYVKVSMDGAPFLRKIDLGMHKGYSELAFALEKFFGCYGIGEAFKDADNAEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSDAKGFDLQPKGSLKGFIEGVTK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8011g00003 234 FunFam Auxin-responsive protein 120 221 - -
Mupr8011g00003 234 Pfam AUX/IAA family 90 217 IPR033389 -
Mupr8011g00003 234 Gene3D - 119 222 - -
Mupr8011g00003 234 SUPERFAMILY CAD & PB1 domains 119 210 - -
Mupr8011g00003 234 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 60 214 IPR003311 GO:0005634|GO:0006355
Mupr8011g00003 234 ProSiteProfiles PB1 domain profile. 125 213 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8011g00003 Mupr-Chr8011 19519 23115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8011g00003 122 232 B3 DNA Binding Superfamily AT4G23980 34.234 1.57e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr8011g00003 AUX_IAA 2.2e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8011g00003 K14484 - gmx:100811879 318.546