Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8003g00004 ATGGGAAAAAAATCGAGTCAGGCGGAGGAAGAAGAAGAGGTGCCGGAGAATCAGCGGTGCAGCCGGACGGACGGGCGGCAATGGCGGTGCCGGCGGCGAGTGATGGAAAACCTAAAGCTGTGCGAGATTCACTACCTGCAAGGTCGGCATCGGCAGCACAAGGAGAAGGTTCCGGAGTCACTGAAGCTGCAGAGGAAGAGGAAAAACGACGCCGTTGAGGTCGAGATTGGGGCGAAGAGGAAGCACAAATCCGCAGAGGCGTTGGCGAGTAGGAGGAAGCAATTGGAGCTGATAAGGATGGTTCTGCAGAGAGAGGTTGAGAAGAAGAGGAAGAAGGAATCGCAATTGCATTTGCATTGTGATCGCGACTTCAACAACGAATTGCCCAACGAGATTGCTTCCGCTTCAACGCCCAATGTGCCTTCTCCTCGTTGTGGTGTTGTCACTGTCACGCCTCGTTACTTCAGGTCCAAGAATCTTGAGAGGGGCTCTGTTGGTAAGTTGCAGTGTGGACGAAACTTGAAGAAGGGGAAGAGGAAGAAGTGTCATTGGTGTCAGAGAAGTGATTCTTGGAGTCTTATAAGTTGTTCGAGCTGCCAGAGAGAGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTTGACACTCAAAATGAGGTTAAGATGGCATGTCCAGTTTGTCGAGGAACTTGCACCTGTAAAGATTGCTTGGCTGGTCAATACAAAGACAGTGAAAGTAAGGAATATTTGGCTGGTAAAAACGAAGTTGATAGGGTATTGCATTTTCATTATTTGGTCTGTACGCTCCTTCCTGTACTAAAACAAATAAAAGAAGACCACCATGTGAAGCTAGAAACAGAAGCAAAAATTAAAGGTAGTACCTATTGTTCTTCTAATATGATGATTTCTGAATTAGTTTTGTTGATTACAACTTGGTTATCTTTGATGCTTTTGTGCATGACAGGGAAAAGAATTAGTTGTTCTCAGGCGTTAAGTCAAGGAAGCACCTCTGAAGAAATCAACTCTTCTATATTCAAGCTACCTGACAAAATAAATGCTTGCATTTCTAGTGAAAGTCGTCTTTTGGGTGATAAGGCCATTTCTAATGGCAATTTAACTGATACCTCAACGTTACCCGAGTGGACAAGTTGTAATGGTGCTGAAAGTGTATCATGCCCACCTCAAAAGCTTGGTGATTGTGGTGATAGCCACCTTGATTTGAAATATGATTTTCCCTTAAGTTGGATCAAAGAAATGGAAGTAAAGGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGATAAAAGTTCAAGCTGCTCACTGTGTGTTGACAAAGATCATAAAACTAGCAGATACAAGCAGTTACAGGAAGTAGCTCAAAGACAAGATTCTAATGATAATTACTTATTTTATCCTACAGTTTTGGACATCAGAAGCAATCATTTTGAACACTTCCAGAAACACTGGGGAAAAGGTCATCCTGTAGTAGTGCGAGATGTGCTCCAAAGTACACCAAACCTTAGTTGGGATCCACTGGTCTTGTTCTGTACTTATCTTGAGAGGAGTATGACAAGATATGAGAATAATAAGGACTTACTTGAAGCCTGTTTGGATTGGTTTGAGGTGGAGATTAATGTTACACAGTATTTTACTGGGTCTATTAAATGTCAACCTCAGAAAAATACTTGGCATGAGATGCTAAAACTTAAAGGGTGGTTGTCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGATGCTCTTCCAATTCAAGAATACATGAATCCCTTGTATGGTCTTCTGAATTTAGCTGCAAATTTGCCACGAGGGAGTACAAAACATGACATAGGACCATATATTTATATTTCATATGGCTGTGCTGACGACAAAGAAGCTGATTCGGTGACAAATCTCTGTTACGACTCATATGACATGGTTAACATTATGGTACATACCATGGACATCCCTCTCTCTACAGATCAGCTTGCTAAAATAAGTAAGTTATTGAAAAAACACACAGCTCTATGTCAAAAGGTGTCTTCTAAAATTACTACTGAGCATGAAGAAGACAGGGAACAAAATGAAATGCATAGTATAATAAGAGAAGGAACTGACTTTTTAAGGAGAGTCAATAGAACATCTTGCATCTCTACTGAAGCCAATACAATATCTAATCGGAATTTAGACACCAATATTTCCAGTGATGAAGAATGTGGTTCTAATTCTGAAACTGAAAAGGCACAAAGCTCTTTACCTTTCCACGGGACAGTTCTAAGCACTGAAATGTCTCCAGATCATAATTGTAGAAATCCCTTTGAAAACACAAGCGGAGATAAAAGGAAGAAGTTTACTGAAAATTCTGGTGCCCGGTGGGATGTATTTCGAAGACAGGATGTGCCAAAGCTCTTAGAATACCTTAAGAGACACTCTGATGAATTTTCTTATACTAGTGAACATCACGAGAAGATGGTTCATCCAATTCTAGATCAGAGTTTCTTTCTTGACAATACTCACAAGATGAGACTTAAGGAGGAGTTTAAAATTGAACCATGGACTTTCGAGCAACATGTTGGAGAAGCTGTCATCATTCCTTCTGGATGTCCATACCAGATTAGGAATCCTAAGTGTTGTGTTCATGTGGAATTGGAATTTGTGTCCCCAGAGAATGTTACCGAGTGTATCCAATTGATTGATGAGGTCCGGCTGCTTCCAAAAGACCATAAAGCAAAAGTAGAAAAGCTGGAGGTGAAAAAAATGGCCCTTTACAGCATCAGTACAGCAATAAAAGAAATACGTGAGCTTACATGCAAAACATGA 2841 0.408 MGKKSSQAEEEEEVPENQRCSRTDGRQWRCRRRVMENLKLCEIHYLQGRHRQHKEKVPESLKLQRKRKNDAVEVEIGAKRKHKSAEALASRRKQLELIRMVLQREVEKKRKKESQLHLHCDRDFNNELPNEIASASTPNVPSPRCGVVTVTPRYFRSKNLERGSVGKLQCGRNLKKGKRKKCHWCQRSDSWSLISCSSCQREFFCMDCIKQRYFDTQNEVKMACPVCRGTCTCKDCLAGQYKDSESKEYLAGKNEVDRVLHFHYLVCTLLPVLKQIKEDHHVKLETEAKIKGSTYCSSNMMISELVLLITTWLSLMLLCMTGKRISCSQALSQGSTSEEINSSIFKLPDKINACISSESRLLGDKAISNGNLTDTSTLPEWTSCNGAESVSCPPQKLGDCGDSHLDLKYDFPLSWIKEMEVKAEEIVCSYDFPETLDKSSSCSLCVDKDHKTSRYKQLQEVAQRQDSNDNYLFYPTVLDIRSNHFEHFQKHWGKGHPVVVRDVLQSTPNLSWDPLVLFCTYLERSMTRYENNKDLLEACLDWFEVEINVTQYFTGSIKCQPQKNTWHEMLKLKGWLSSQLFKEQFPAHFAEVIDALPIQEYMNPLYGLLNLAANLPRGSTKHDIGPYIYISYGCADDKEADSVTNLCYDSYDMVNIMVHTMDIPLSTDQLAKISKLLKKHTALCQKVSSKITTEHEEDREQNEMHSIIREGTDFLRRVNRTSCISTEANTISNRNLDTNISSDEECGSNSETEKAQSSLPFHGTVLSTEMSPDHNCRNPFENTSGDKRKKFTENSGARWDVFRRQDVPKLLEYLKRHSDEFSYTSEHHEKMVHPILDQSFFLDNTHKMRLKEEFKIEPWTFEQHVGEAVIIPSGCPYQIRNPKCCVHVELEFVSPENVTECIQLIDEVRLLPKDHKAKVEKLEVKKMALYSISTAIKEIRELTCKT 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8003g00004 946 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 15 944 IPR045109 GO:0032454|GO:0033169
Mupr8003g00004 946 Pfam JmjC domain, hydroxylase 796 892 IPR003347 -
Mupr8003g00004 946 MobiDBLite consensus disorder prediction 739 758 - -
Mupr8003g00004 946 ProSiteProfiles Zinc finger RING-type profile. 182 228 IPR001841 -
Mupr8003g00004 946 Pfam WRC 15 56 IPR014977 -
Mupr8003g00004 946 SUPERFAMILY Clavaminate synthase-like 484 929 - -
Mupr8003g00004 946 SMART cupin_9 585 909 IPR003347 -
Mupr8003g00004 946 ProSiteProfiles JmjC domain profile. 604 909 IPR003347 -
Mupr8003g00004 946 MobiDBLite consensus disorder prediction 770 789 - -
Mupr8003g00004 946 Coils Coil 85 112 - -
Mupr8003g00004 946 Gene3D Cupin 476 918 - -
Mupr8003g00004 946 ProSiteProfiles WRC domain profile. 14 60 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8003g00004 Mupr-Chr8003 27725 33392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8003g00004 15 54 GRF Transcription Factor Family AT2G22840 52.500 3.14e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr8003g00004 JmjC 2.8e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8003g00004 K15601 - gmx:100799234 1549.26