Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr799g00004 ATGGATTGTTTGGTTCTTCCTATTCCGGCCCTTGTGCTGAATGGACCAGGCTTTTACTCGGCAGTTTTGTTTTCAAACATTTATTCTTGCACTTTCTTGTGTGGTAAGCTACACACGTTGAGGAGAACAAAAAGGGTCAGAATGCGAAGGAATCAAAAGTTCTACTTTAAAGCTGGAGAAGATTACACAGATGAAAGCCTTTCATATCATTTTCCAACATCTGAAGAAACAAGCAGATCAATTTCGCGTAGAAGGAGGGACTATAAAGGCTCCCACTTAAGGAAGTCTTTGCAGCCTAGGAAGCATCTTGCTCGAGTTGAAATTAGTAGAGATCTCAGATATCAAAATAAAAGGAATTATAGTAGTGGAGATCAAAGTTACACAAGCAATGATTTTAAGCATGGCAATTACATAGGCTCGGTCCATGACATCAAGTTTGTTCATCCCCAAAGAAATCTCAAAAACTGTGATTCTATATTGATCCACTCAAATACCTCAATTGCATTCATTTGTTCTCAATCCACCAACTTCATTGGAACATCCCTTTGCCCTTCAATGGAAGGTGAGGAGGGGAAACAGTCTTCCCACAAAAATCCTTACGTTGAACTCGAGGAAGTTGACTTTGATTTTATTCTAGCAATGGACATGCAAGGACAAGAGAGAGAGTTCACAATGCTTCCAACTATTGAAAGTGAAAGTGATGAAGGTCTAAGTGACTCCTCTTTTAACAATGATGATGATCCTGACTTTTTAGAGAGCCAAGAGTTTGAAACCGACAACGATGATGAAACAGAAGTGGAAGACGATGAGATTGATCCAGACGACTTATCTTATGAAGTGATGATGGAGTTGGGAGAGTTTATAGGAGAAGAAACAAGAGGATTGTCAGCAAATGAAGTCTCTTTGTGCTTGTTCCCTTATACTTGTTACCAATGTGCTGAAAGCAAAAGTGGCATCGATCGTTGTGTGATTTGTCAGGTTGAATATGAAGAAGGTGAATCGTTGGTGGCACTTCAGTGTGAGCACCCTTATCATGCAGATTGCATAAGCAAGTGGCTTCAAATTAAGAGGGTTTGTCCAATTTGTAGCAATGAAGTTTCAACTCCCAACATGGCTTCCAACCCTTAG 1128 0.3998 MDCLVLPIPALVLNGPGFYSAVLFSNIYSCTFLCGKLHTLRRTKRVRMRRNQKFYFKAGEDYTDESLSYHFPTSEETSRSISRRRRDYKGSHLRKSLQPRKHLARVEISRDLRYQNKRNYSSGDQSYTSNDFKHGNYIGSVHDIKFVHPQRNLKNCDSILIHSNTSIAFICSQSTNFIGTSLCPSMEGEEGKQSSHKNPYVELEEVDFDFILAMDMQGQEREFTMLPTIESESDEGLSDSSFNNDDDPDFLESQEFETDNDDETEVEDDEIDPDDLSYEVMMELGEFIGEETRGLSANEVSLCLFPYTCYQCAESKSGIDRCVICQVEYEEGESLVALQCEHPYHADCISKWLQIKRVCPICSNEVSTPNMASNP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr799g00004 375 SUPERFAMILY RING/U-box 321 369 - -
Mupr799g00004 375 MobiDBLite consensus disorder prediction 231 270 - -
Mupr799g00004 375 SMART ring_2 322 362 IPR001841 -
Mupr799g00004 375 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 189 268 IPR043312 -
Mupr799g00004 375 FunFam E3 ubiquitin ligase BIG BROTHER-related 287 369 - -
Mupr799g00004 375 MobiDBLite consensus disorder prediction 85 99 - -
Mupr799g00004 375 Pfam Ring finger domain 321 362 IPR001841 -
Mupr799g00004 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 320 372 IPR013083 -
Mupr799g00004 375 MobiDBLite consensus disorder prediction 78 99 - -
Mupr799g00004 375 MobiDBLite consensus disorder prediction 239 270 - -
Mupr799g00004 375 ProSiteProfiles Zinc finger RING-type profile. 322 363 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr799g00004 Mupr-Chr799 24557 27547 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr799g00004 257 366 C3H Transcription Factor Family AT3G63530 45.045 2.17e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr799g00004 K19045 - gmx:100526881 291.197