Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr799g00001 ATGACAAAGGATGCCCAATTTGCATTACGAAGAGTGATTGAGAAATATACAAAAAGCACTAGGTTTGCACTTATCTGTAATCATGTAAACAAGATTATTCCTGCACTTCAATCAAGATGCACTCGGTTCCGGTTTGCCCCTCTTGATGCCATCCATGTTACGGAAAGACTGGAACATGTTATCAAGGCTGAAGGGCTTGATGTTGAAGACAGAGGCTTAGCAGCTGTTGTTCGGCTTAGCAATGGTGACATGAGAAGGGCTTTGAATATTCTTCAGTCAACACATATGGCTTCTCAACAGATTACAGAAGAAGCTATTTACCTGTGCACTGGAAATCCATTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATGCAGATAGCTTTAAAAGAATATATGAAATGAAGACAAGGAAAGGGTTGGCCCTGGTTGATATTGTCAGAGAAGTGACAATGTTTGTTTTCAAGATTAAGATGCCTTCAGCTGTTCGAGTACAGTTGTTGAATGATTTGGCAGACATAGAATTAAGTTTTGGGTGCAACGATAAGCTTCAGCTTGGATCGGTTATTGCTTCTTTTACACGTGCTAGATCTGCA 612 0.3987 MTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAIHVTERLEHVIKAEGLDVEDRGLAAVVRLSNGDMRRALNILQSTHMASQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYADSFKRIYEMKTRKGLALVDIVREVTMFVFKIKMPSAVRVQLLNDLADIELSFGCNDKLQLGSVIASFTRARSA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr799g00001 204 FunFam Replication factor C subunit 5 50 112 - -
Mupr799g00001 204 Gene3D - 113 204 - -
Mupr799g00001 204 FunFam Replication factor C subunit 5 113 204 - -
Mupr799g00001 204 Pfam Replication factor C C-terminal domain 113 197 IPR013748 -
Mupr799g00001 204 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 1 191 - -
Mupr799g00001 204 Gene3D - 51 112 - -
Mupr799g00001 204 SUPERFAMILY post-AAA+ oligomerization domain-like 113 201 IPR008921 GO:0003677|GO:0006260
Mupr799g00001 204 Gene3D - 1 47 IPR027417 -
Mupr799g00001 204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 98 IPR027417 -
Mupr799g00001 204 CDD HLD_clamp_RFC 48 110 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr799g00001 1 203 Core DNA Replication Machinery Family AT1G77470 76.526 6.87e-119 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr799g00001 K10756 - gmx:100782652 377.867