Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr797g00008 ATGAACGAGAAGGCCAACGTCTCCAAAGAGCTCAACGCTAAACACAAAAAGATACTGGAAGGACTTCTTAAACTACCAGAGAATAAGGAATGTGCAGACTGCAAAGCTAAGGGGCCAAGATGGGCTAGTGTCAATCTTGGTATCTTTATATGCATGCAGTGTTCAGGAATACATAGAAGTCTTGGGGTACACATATCAAAGGTTCGCTCTGCAACTTTGGATACCTGGCTCCCAGAGCAGGTTGCATTCATTCAATCGATGGGAAATGAGAAGGCAAATAGTTACTGGGAAGCAGAATTACCCACAAATTATGATAGAGTTGGAATTGAAAATTTCATTCGTGCAAAGTATGAAGATAAGAGATGGGCTGCAAGGGATGAGAAACCAAAATCACCTTCTAGATTTCGGGAAGAGAAAAGCCCTTCACATGTGCAAAAGCCTGTTGAAAGAGGTGGGCATAGTTATGCAGCTGTGTCTGAGAATACTTTTGAGGGAAGGAAGAAAATCCAACCATCAAATGCAATTCCTGCTACAAGAATTAGTGTGCCTGCTCCTCCCAAAGGGCCTGAGCTGGTAATTCCTGTGGCAAAACCTCAATATGTTGAGAAACTGGAACCTGTTGCACCACCACCACAAGCTGAAACTTCAAAACAGATTACTGACATGACTCCAAAAGTTGACTTCGCCACGGACCTTTTTGACATGTTGTCGATGGATGGTCCAAATGAGAAGGGCTCAGGGGCAGCTGATGCTACTGCTGATGATAATAACTGGGCAGCTGCCACAGAGGCATCAACAGCCAGGAAGACTGATGCCACGAAAGCAGTTGAGAGTACACCCCAGTCCACTTCTGGAATTGAGGACTTATTTAAAGACTCACCTTCAGTTACACCAAGTTTAACTCCAGAAAAACCACAAAAAGATGTAAAAAATGATATCATGAGCCTCTTTGAGAAGACCGATATGGTGTCTCCATTTGCTAGGCATCAACAGCAGCTGGCCATGCTGGCACAGCAACAGTCTCTTCTAATGGCTGCTGCTGCTAAAGCTGCTGGTGGGGATTCCAAGTACCTGGCCAGCTTACAACAACAGTCTTTTCTAATGGCTGCTGCTGCTGCTAAATCTGCTGGTGGGGATTCAAAGTACCCAGCCAGCATACAACAACCCGGGTCCAATATTCCTGTCCAAAGTTGGCCAGCTTCTGGCTACCCAATCCCAGGCCCAATGCCCATGAGTGGTCAGGAAGAGTTGCAGAAACTCATGCAGACAATGAACATGACTGCAGCGCATTCAGCAGGGAGTTCAGTTCAGTATCCACCATCCAGTTACTATGGCATGGGGCAAGTTGCTCCAGTTAACGGTACAACGACAACGGGAGTGAGCAAACCAGAGTCAGCATCTCCGGTATCATCGACCACTTCAAAGACAGGGAGCGATTATGATTTTTCCTCCTTAACACAAGGAATGTTTGCAAAACACTGA 1482 0.4582 MNEKANVSKELNAKHKKILEGLLKLPENKECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPTNYDRVGIENFIRAKYEDKRWAARDEKPKSPSRFREEKSPSHVQKPVERGGHSYAAVSENTFEGRKKIQPSNAIPATRISVPAPPKGPELVIPVAKPQYVEKLEPVAPPPQAETSKQITDMTPKVDFATDLFDMLSMDGPNEKGSGAADATADDNNWAAATEASTARKTDATKAVESTPQSTSGIEDLFKDSPSVTPSLTPEKPQKDVKNDIMSLFEKTDMVSPFARHQQQLAMLAQQQSLLMAAAAKAAGGDSKYLASLQQQSFLMAAAAAKSAGGDSKYPASIQQPGSNIPVQSWPASGYPIPGPMPMSGQEELQKLMQTMNMTAAHSAGSSVQYPPSSYYGMGQVAPVNGTTTTGVSKPESASPVSSTTSKTGSDYDFSSLTQGMFAKH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr797g00008 493 CDD ArfGap 19 117 - -
Mupr797g00008 493 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Mupr797g00008 493 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Mupr797g00008 493 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Mupr797g00008 493 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Mupr797g00008 493 MobiDBLite consensus disorder prediction 452 483 - -
Mupr797g00008 493 SMART arf_gap_3 16 131 IPR001164 GO:0005096
Mupr797g00008 493 MobiDBLite consensus disorder prediction 123 188 - -
Mupr797g00008 493 MobiDBLite consensus disorder prediction 123 146 - -
Mupr797g00008 493 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Mupr797g00008 493 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Mupr797g00008 493 MobiDBLite consensus disorder prediction 260 309 - -
Mupr797g00008 493 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 360 IPR044520 GO:0005096
Mupr797g00008 493 MobiDBLite consensus disorder prediction 260 304 - -
Mupr797g00008 493 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Mupr797g00008 493 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr797g00008 Mupr-Chr797 49283 56263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr797g00008 16 118 C2H2 Transcription Factor Family AT4G05330 50.442 3.43e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr797g00008 K12486 - gmx:100807561 799.66