Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7972g00001 GTGACCTTGGAACTGTTTCATTTGAAGACATTTGTTGCATTTGACATTATAGGTTGTGTTCCAATACTTCATCCTCCAGTAATGACTTGTTTCCCATTCTTATTTGGTAAGAAAGTGCGTTTTGTGGCAAAACATGATCCAGATATTGATGAAGAACTCTCAGGCATTCAAAATGTAAGAATCTATACCTACAAAGATCTAAAAGTTGCAACTGATAATTTCAGTCCAGCTAATAAAATTGGGCAGGGTGGCTTTGGTTCAGTTTATAAGGGATTGCTAAAAGATGGGAAAGTAGCTGCTATAAAAGTTCTTTCAGCAGAATCAAGTCAAGGAGTGAAAGAATTTATGACAGAGATTAATGTGATCTCAGAAATAGAGCATGAAAATTTGGTTAAGCTTTATGGTTGTTGTGTGGAAGGGAGTCAGCGAATATTAGTCTACAATTATCTTGAGAACAATAGCCTTGCACAAACCCTTCTAGGTTCAGGTCACAGTAATATCTATTTTGATTGGAAAGCACGATCTAGGATTTGCATTGGGGTTGCACGTGGGCTTGCCTATCTTCATGAGGAAGTAAGACCACATATTGTTCACAGGGATATAAAAGCAAGCAATATTCTCCTTGACGAAAACCTTACACCCATGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCATCATACATGACTCATGTCAGCACACGTGTAGCAGGAACAATAGGTTATTTGGCACCAGAGTATGCAATAAGGGGGCAGCTGACACGGAAAGCAGATATTTACAGCTTTGGTGTCCTCCTGGTGGAGATAGTTAGTGGAAGATGTCACACAAATACACGACTACCGATGGGAGAACAATATCTTTTAGAAACGACGTGGGAACATTATCAGCAAAGGGAATTGGTAGGGCTTGTAGACATATCGCTAAACGGTCACTTCGACGCCGAGGAGGCTTGTAAATTTCTGAAAATTGGACTTCTCTGCACTCAGAACACGTCGAAGCTCCGGCCATCCATGTCTTCTGTCGTCAAGATGCTCACCGGAGAAATGGATGTTGATGAAAGTAGGATAACAAAGCCAGGTTTGATTTCAGATTTTATGGACCTTAAAATCAGAGAAGAAAAAGGTGGTAGTGGTGATATTGATGATCCCAAGGCTTCTTCATCTTCGTACAATGCATCCTCTGCCTCGGACAGCCAGGGCAATACCATGTCATATGCTGCAAGTTCAACTACAACTTTCACTGTCAAATATGATCAAAGCTTGTAA 1266 0.4036 VTLELFHLKTFVAFDIIGCVPILHPPVMTCFPFLFGKKVRFVAKHDPDIDEELSGIQNVRIYTYKDLKVATDNFSPANKIGQGGFGSVYKGLLKDGKVAAIKVLSAESSQGVKEFMTEINVISEIEHENLVKLYGCCVEGSQRILVYNYLENNSLAQTLLGSGHSNIYFDWKARSRICIGVARGLAYLHEEVRPHIVHRDIKASNILLDENLTPMISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYAIRGQLTRKADIYSFGVLLVEIVSGRCHTNTRLPMGEQYLLETTWEHYQQRELVGLVDISLNGHFDAEEACKFLKIGLLCTQNTSKLRPSMSSVVKMLTGEMDVDESRITKPGLISDFMDLKIREEKGGSGDIDDPKASSSSYNASSASDSQGNTMSYAASSTTTFTVKYDQSL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7972g00001 421 Pfam Protein kinase domain 77 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr7972g00001 421 FunFam cold-responsive protein kinase 1 45 149 - -
Mupr7972g00001 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Mupr7972g00001 421 MobiDBLite consensus disorder prediction 373 404 - -
Mupr7972g00001 421 CDD STKc_IRAK 80 347 - -
Mupr7972g00001 421 MobiDBLite consensus disorder prediction 382 404 - -
Mupr7972g00001 421 FunFam cold-responsive protein kinase 1 150 361 - -
Mupr7972g00001 421 ProSiteProfiles Protein kinase domain profile. 74 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr7972g00001 421 Gene3D Transferase(Phosphotransferase) domain 1 150 358 - -
Mupr7972g00001 421 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Mupr7972g00001 421 SMART serkin_6 74 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr7972g00001 421 SUPERFAMILY Protein kinase-like (PK-like) 53 345 IPR011009 -
Mupr7972g00001 421 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Mupr7972g00001 421 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 43 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7972g00001 Mupr-Chr7972 9989 14257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7972g00001 41 358 Receptor kinase-like Gene Family AT1G53430 53.918 1.01e-110 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr7972g00001 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7972g00001 - - gmx:100797706 696.041