Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7964g00003 ATGGGTGCAACCACAGGGTCGAGTGACGCAGTGGGTGAATCTGACACAATTGAGATAACTGGGAAGATCATGGTGGTGGCCATAATATTCCTCTTCATGGTGGTTGTGTTTGTCCTTGTGCTCCATCTCTATGCCAAGTTTTTCTGGTGGAGCATGGAGGAAAACACCGCTCCTCAGCCCCAGCGGCGGCGGCGGAGGCGGCGGTTCGTCTTCGCCCCCGGCCAAGACCCGGTGGTATATGAAACTCACCATGTTGGGCTTGACCCTTCGGTTCTTAGGTCCTTGCCAGTGTTGGTGTTCCAACCTGAAGACTTCAAAGAAGGTTTGGAGTGTGCAGTTTGTCTCTCTGAGATTGTTGAAGGTGAAAAGGCCAGGCTTTTGCCCAAATGCAATCATGGATTTCATGTGGATTGCATTGACATGTGGTTCCATTCACACTCCACTTGTCCTCTTTGTAGGAACCCTGTTGCCTTTGAATTCTCTAAAAGTGAAGAGAATAATGTCTCAGGGAGTACTGACTCATCATCACATGAAGAGAATTCAGCTGCTATGACTGGTTTAGAGTCTTCAAATTTTCCCACAAATGTGTTGGTTTGGGGGAACCAGAGAGAGGTTAGGTCTTTTGGGGTTTCCTTGGAAGAAGGGACTTCTCAGCAGCCACCTTGTTCTCCATCATCTACACCTTCTTCTTCTTCAGCTAATGGTGGTGATGTTAATGGTAGATGTCATGGAATGTTGGTGATTGATATTCCAAGTGAATGCACTTCCTCCTCTTTGTCCCCTTCTGGGAGTAGGTGTGCTGAAGATGAGGTGAAATCACCAATGGCTGCCACATTGAGGAGAGTTGTTCTTCCGGGGAGAGAGCTCTCAAAGAGTCATTGTTATGCTACTTCCTTTCCAATACTTGTGCACATAATGGCTAAGGACGACGAATAA 936 0.4744 MGATTGSSDAVGESDTIEITGKIMVVAIIFLFMVVVFVLVLHLYAKFFWWSMEENTAPQPQRRRRRRRFVFAPGQDPVVYETHHVGLDPSVLRSLPVLVFQPEDFKEGLECAVCLSEIVEGEKARLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVAFEFSKSEENNVSGSTDSSSHEENSAAMTGLESSNFPTNVLVWGNQREVRSFGVSLEEGTSQQPPCSPSSTPSSSSANGGDVNGRCHGMLVIDIPSECTSSSLSPSGSRCAEDEVKSPMAATLRRVVLPGRELSKSHCYATSFPILVHIMAKDDE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7964g00003 311 CDD RING-H2_EL5-like 110 153 - -
Mupr7964g00003 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 161 IPR013083 -
Mupr7964g00003 311 MobiDBLite consensus disorder prediction 165 187 - -
Mupr7964g00003 311 MobiDBLite consensus disorder prediction 211 238 - -
Mupr7964g00003 311 Pfam Ring finger domain 110 153 IPR001841 -
Mupr7964g00003 311 SUPERFAMILY RING/U-box 91 159 - -
Mupr7964g00003 311 MobiDBLite consensus disorder prediction 211 237 - -
Mupr7964g00003 311 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 19 180 - -
Mupr7964g00003 311 FunFam RING-H2 finger protein ATL3 79 158 - -
Mupr7964g00003 311 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Mupr7964g00003 311 SMART ring_2 111 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7964g00003 Mupr-Chr7964 9983 12404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7964g00003 18 280 C3H Transcription Factor Family AT1G53820 41.115 3.76e-60 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7964g00003 - - gmx:100775523 401.749