Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7939g00001 ATGTTGTGGCCATTCAAGGTCATTGCTGATTCTGATGACAAACCCATGATAGTTGTTTCATACAAGGGTCAAGAGAAGCATTTTTCAGCCGAGGAAATCTCATCTATGGTCCTTACAAAGATGCGCGAGATTGCAGAGGCATATTTGGAATCACCTGTAAAGAATGCTGTTGTTACTGTGCCTGCTTATTTCAATGACTCTCAGCGTAAAGCCACCATAGATGCTGGTGCTATTGCTGGCCTCAATGTTATGCGGATAATCAATGAACCCACTGCTGCAGCTATTGCATATGGTCTTGACAAGAGAACTAATTGTGTTGGAGAGCGAAACATTTTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTCACAATTAAGGATAAGGTCTTCCAAGCTAAGGCTACTGCAGGAAACACTCACCTTGGGGGAGAGGACTTTGACAACAGAATGGTAAACTATTTTGTAGAGGAGTTAAAAAGGAAGAAGAAAGTGGATATCAGTGGAAACCCAAGAGCTATGAGGAGGTTGAGAACTGCATGTGAGAGGGCAAAAAGGACACTCTCCTATGCTGTTGATACAACCATTGACATAGATGCTTTATATCAAGGCATTGACTTCTCTTCTCCAATAACTCGTGCAAGGTTTGAGGAAATCAATATGGACCTCTTTAGAAAGTGTATGGAGACAGTAGATAGGTGTCTCGTGGATTGTAAGATGGACAAGAATGATATACATGATGTTGTACTTGTTGGTGGTTCTTCTAGGATACCCAAAGTGCAGCAGCTATTACAGGACTTGTTCAAGGGCAAGGATTTATGCAAGAGTATAAATCCTGATGAGGCTGTAGCTTATGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGAAGGCATTAAGAATGTTCCAAACTTGGTGTTGTTGGATGTTACACCACTGTCACTTGGTATATCTGTACAGGGAGATCTCATGAGTGTGGTGATTCCTAGGAATACTACCATTCCTGTAAAGAGGACAAAAGAATACCTTACAGTTAAAGATAGTCAATACTCTGCTTTAATTAAGGTTTATGAGGGTGAGAGAGCAAGAGCCAGTGATAATAATTTTTTGGGTTCTTTTCGCCTTTATGGCTTTCCTAGAGCCTTTGAAGGTCATTCTCCTTCTCTTGAGGTGTGTTTTGCCATAGATGAAAATGGTATCTTATCTGTTTCTGCAGAGGAAAAAATCACGGGCAATAGGAGTGAGATTACCCTAACCAATAACAAAGAAAGATTGTCAACGGTAGAAATTGAGAGAATGATTCAAGAAGCTGAGTATTACCAGGTTGAAGATAGAAAGTTTCGTAGGAAGGCCATGGCAATGAATGCTTTGGATGATTATGTTTACAAGCTGGGGAATGCTTTGAAGAAGGACGAAATCAGCTCACAAGAAAGAGTGAAGATTAGTTCTGCAATTACTAAGGCCACAAATTTGCTTAATGCTAATGACTCACAGGTTCAAACAGAGGTGCTTGAGAATTATTTGGAAGAGCTTGTCACTCGCTTTCAACAGCTCATTGGCTACTCTGCTTAG 1575 0.4102 MLWPFKVIADSDDKPMIVVSYKGQEKHFSAEEISSMVLTKMREIAEAYLESPVKNAVVTVPAYFNDSQRKATIDAGAIAGLNVMRIINEPTAAAIAYGLDKRTNCVGERNIFIFDLGGGTFDVSLLTIKDKVFQAKATAGNTHLGGEDFDNRMVNYFVEELKRKKKVDISGNPRAMRRLRTACERAKRTLSYAVDTTIDIDALYQGIDFSSPITRARFEEINMDLFRKCMETVDRCLVDCKMDKNDIHDVVLVGGSSRIPKVQQLLQDLFKGKDLCKSINPDEAVAYGAAVQAALLSEGIKNVPNLVLLDVTPLSLGISVQGDLMSVVIPRNTTIPVKRTKEYLTVKDSQYSALIKVYEGERARASDNNFLGSFRLYGFPRAFEGHSPSLEVCFAIDENGILSVSAEEKITGNRSEITLTNNKERLSTVEIERMIQEAEYYQVEDRKFRRKAMAMNALDDYVYKLGNALKKDEISSQERVKISSAITKATNLLNANDSQVQTEVLENYLEELVTRFQQLIGYSA 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7939g00001 524 FunFam Endoplasmic reticulum chaperone BiP 6 111 - -
Mupr7939g00001 524 Gene3D - 456 521 IPR029048 -
Mupr7939g00001 524 FunFam Heat shock protein ssb1 1 36 - -
Mupr7939g00001 524 PANTHER HEAT SHOCK PROTEIN 70KDA 2 487 IPR013126 GO:0005524|GO:0140662
Mupr7939g00001 524 Pfam Hsp70 protein 3 519 IPR013126 GO:0005524|GO:0140662
Mupr7939g00001 524 SUPERFAMILY Actin-like ATPase domain 2 101 IPR043129 -
Mupr7939g00001 524 Gene3D - 37 294 - -
Mupr7939g00001 524 ProSitePatterns Heat shock hsp70 proteins family signature 3. 250 264 IPR018181 -
Mupr7939g00001 524 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 454 517 IPR029048 -
Mupr7939g00001 524 PRINTS 70kDa heat shock protein signature 247 263 - -
Mupr7939g00001 524 PRINTS 70kDa heat shock protein signature 119 129 - -
Mupr7939g00001 524 PRINTS 70kDa heat shock protein signature 305 324 - -
Mupr7939g00001 524 PRINTS 70kDa heat shock protein signature 56 76 - -
Mupr7939g00001 524 PRINTS 70kDa heat shock protein signature 279 299 - -
Mupr7939g00001 524 PRINTS 70kDa heat shock protein signature 387 403 - -
Mupr7939g00001 524 SUPERFAMILY Actin-like ATPase domain 108 297 IPR043129 -
Mupr7939g00001 524 Gene3D Actin; Chain A, domain 4 146 228 - -
Mupr7939g00001 524 Gene3D - 3 36 - -
Mupr7939g00001 524 Gene3D - 102 276 - -
Mupr7939g00001 524 ProSitePatterns Heat shock hsp70 proteins family signature 2. 113 126 IPR018181 -
Mupr7939g00001 524 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 302 459 IPR029047 -
Mupr7939g00001 524 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 301 455 IPR029047 -
Mupr7939g00001 524 FunFam Heat shock 70 kDa protein 299 455 - -
Mupr7939g00001 524 FunFam Heat shock 70 kDa 145 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7939g00001 Mupr-Chr7939 8551 10125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7939g00001 3 512 Calmodulin-binding Proteins AT3G12580 65.825 0.0 697