Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7900g00002 ATGTTGATAGCGGTTAGGGAAGCTTCCTGTTGCTCTCCCCTCAGTTTCTGGCATAATGGTGTCAAGGCAAAACCTTCTAGAACACTCAAAACATCCATTTGCCAAGCCAGTTTCTGTGTCCAAAGAAAACTCACTCATTCATGGAATACTGGCCATCTCTCTACCAGCAGTGAGGTAGCAAATTTTGATCCCTTGGGTATTAACCCTTCTGCTCTGAATTCTACCTGGGAAAATTTGGTGTGCTTGTTTACACAAACATTTGAAAGTGCATCAAGCACAGAAAAGGGAAAACCTAACCCTTCTCAAGGGGTAGCAGCTGCAATAGAGGATAGTTCAATAGATTTTGGTGACTTTTTTAAAGGTCCACTGCCAGGGAAGTTTCTGAAGCTTTTAGGGTTTCTTGCCTTGTCACGGCTTGGAGTGTACATACCCCTAGGTGGAGTTAACAGGGAGGCTTTTGTTGGAAATTTGGATCAAAATAGTTTATTAAGCACTTTGGACTCCTTTTCTGGTGGAGGTATTGGTAGACTTGGGGTATGCTCCCTTGGTATTGTTCCCTTCATCAATGCACAGATTGTTTTCCAGCTTGTCGCACAAATATATCCCAAATTGCAAGATCTTCAAAAGAAAGAAGGTGAGGCTGGAAGAAAGAAAGTTCTGCAGTACACTCGATATGCTTCGGTTGGATTTGCCATTGTACAGGCAATTGGCCAAGTTCTTTACCTACGTCCCTATGTCAACGACTTTTCTGTAGAGTGGGTTCTTTCTTCTGTTATCTTATTGACTCTTGGCTCTGTGTTTACAACATACATCGGTGAACGAATTACAGACCTAAAACTTGGGAATGGCACCTCTCTTTTGATATTCACAAACATTATCTCCTACTTGCCAGCTTCTTTTGGTAGGACATTTGCGCAAGCATTTAATGATGCCAACTACATTGGACTTGCTACCATCATTGTATCCTTCTTTTTGTTGGTAGTTGGTATTGTCTATGTTCAGGAAGCAGAGAGAAAAATCCCTCTTAACTATGCTTCTAGATTCACCAGCAGAAGCACTGGACTTGAAAAGTCTGCTTACCTACCCTTTAAGGTAAATAGTTCTGGAGTAATGCCTATTATATTTTCTACATCATCACTAGCTCTTCCTGGTACTTTAGCACGTTTCACTGGTTTAGCTGCGCTAAAGAAGGCTGCAGTGGCGTTAAATCCAGGAGGTTCTTTCTACCTTCCATTCAACATACTTTTGATAGCCTTCTTCAACTACTATTACACCTTCCTTCAACTGGACCCTGATGATGTGAGTGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTTGTCAGACCAGGCAGAAGTACAGCTACATTTATCAAAACAGTTCTGAGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCTATCTTGGCTGCTGGTCCAGCTGTTGTTGAGCAGATTACTCACTTGACTGCATTCCGAGGATTTGCAGGAACATCTATTCTTATTCTTGTTGGTTGTGCAACAGACACCGCAAGAAAAGTTCAAGCTGAGATTATATCCCAAAAGTACAAGAACATAGAGTTCTATGACTTAGATAAATATTGA 1605 0.4131 MLIAVREASCCSPLSFWHNGVKAKPSRTLKTSICQASFCVQRKLTHSWNTGHLSTSSEVANFDPLGINPSALNSTWENLVCLFTQTFESASSTEKGKPNPSQGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGVCSLGIVPFINAQIVFQLVAQIYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSVEWVLSSVILLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTFAQAFNDANYIGLATIIVSFFLLVVGIVYVQEAERKIPLNYASRFTSRSTGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLAALKKAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQITHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDLDKY 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7900g00002 534 Gene3D SecY subunit domain 118 523 IPR023201 -
Mupr7900g00002 534 ProSitePatterns Protein secY signature 1. 178 197 IPR030659 -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 251 276 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 462 480 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 407 429 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 177 197 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 496 514 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 127 145 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 219 242 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 277 300 - -
Mupr7900g00002 534 PRINTS Preprotein translocase SecY subunit signature 368 387 - -
Mupr7900g00002 534 Hamap Protein translocase subunit SecY [secY]. 115 527 IPR026593 -
Mupr7900g00002 534 Pfam SecY 179 510 IPR002208 GO:0015031|GO:0016020
Mupr7900g00002 534 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 119 526 IPR002208 GO:0015031|GO:0016020
Mupr7900g00002 534 NCBIfam preprotein translocase subunit SecY 126 523 IPR002208 GO:0015031|GO:0016020
Mupr7900g00002 534 SUPERFAMILY Preprotein translocase SecY subunit 119 517 IPR023201 -
Mupr7900g00002 534 ProSitePatterns Protein secY signature 2. 270 287 IPR030659 -
Mupr7900g00002 534 FunFam Preprotein translocase subunit SECY, chloroplastic 118 523 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7900g00002 46 534 Chloroplast and Mitochondria Gene Families AT2G18710 84.008 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7900g00002 K10956 - gmx:100810430 924.08