Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7890g00002 ATGGGTTGCATTAACTCCAAAAATGCGGTTGCCGGAGCTCTTTCTCCGTCTCCGGCGATGGTGGACATTGCGGAGACGGTTCCTGCTTCCACCAGGGACCATTCTGGGTTGCATGGTTATGAACCCAAAACAGGTTCGGAGGATGAGAGGAACAACAAGTTCAAGAAGAATAGTTCAAAAAAGAGTGGTGGGTCTTTCAACTTCAGGCTTGGGTTGGCTCAGAGGCATGTGGAGGCTGAACAAAATGCAGCTGGTTGGCCTCCTTGGCTCACAGCTGCTGCAGCAGAAGCCATTCAAGGATGGATCCCCCTCAAAGCTGATTCTTTTCAAAAGTTAGAGAAGGTACTCTACTACTATGTCTTCATAAGTATTGGACAAGGTACATATAGCAGTGTGTTCCGAGCTCGTGAAGTTGAAAGTGGAAAGATGTATGCTTTGAAGAAGGTGCGCTTTGACAATTTCCAGCCTGAGAGCATTAGATTCATGGCAAGAGAAATAACAATCCTACGTAGGCTTGACCACCCAAACATCATGAAATTGGAGGGCATAATCACTTCCCGCCTATCAAGTAGCATATACCTTGTGTTTGAATACATGGAGCATGATCTTGCTGGCCTAGTGTCTCGTCCTGATATTGTGTTCACTGAATCACAGATAAAATGTTACATGAGGCAGCTATTAAGTGGACTTGAGCATTGTCATATGCGTGGTATCATGCATAGAGACATTAAAGTATCAAATATTTTATTGAACAATGAAGGTGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACAATTAGCACAAATAACAAGCATCAGTTGACAAGTCGTGTTGTGACTCTATGGTATCGCCCTCCCGAACTCTTGATGGGATCAACCACCTATGGAGTATCAGTGGATCTATGGAGTGTTGGCTGTGTATTTGCAGAACTTTTTCTTGGGAAGCCTATCCTTAAGGGGAGAACTGAGGTTGAACAATTACACAAAATTTTTAAGCTGTGTGGTTCTCCACCTGAAGAGTTCTGGAAAAAGACTAAGCTTCCTCATGCAACAATGTTTAAACCTCAGACTAATTACGAAACCTCTCTTCGGGAGAGGTGTGCAGATTTTCCTGCAACTGCTGTAGACCTACTTGAGATTTTATTGTCGATTGACGCAAACAACCGAGGGACTGCCTCATCTGCCTTAATGTCTGAGTATTTCAGCACCAAGCCATTTGCTTGTAGTCCATCAATCTTGCCAAAGTATCCACCTAGCAAAGAAATGGATGTCAAAAGTCGGGATGATTCATCCAGGAAAAAGACTGGAGGTAATAAAATGAGAGAGGTTGCAACATCAAGAAGGCAGCAAAGATGGGTCGGTAAAGTTTTGCAAGAACCAAACAATGTCGGCAAATCAACTTCAAAAGAGGACATGCAGAACATTTATGAAAATGCTCATAGAGATGAAGGTAAAACACTTCTTACAAAGGGAAAAGGAGGAGGCATGTACAAAGAGCACACAAAGCCTCCATTGGATGCTATGTCTGAGGCTTCCCAAATGGTGAATGTTGCTAATGGTAATGGCTATAGTGTTCCTGTACAAGTCCAAGGATCTACCGATGCCTTTACATGGGCAAAAAGGAGAAAACAAGATGCATCATCAACTCTATCAGATGGCTCAAGAAGCAAAATTAGTGCACTGGATCCACACTTTGCAAAAGGCACATATGACTTGACCAACCAAAGGGTGTCCATGGATTTTGACCCTGCAGAACTAATAAATGCTCAGGGTGACAGAGATGAATATGGTATGCGACGTGCAGTTCGTAAATCAAGGTTTGGAAGAGGTAAATAA 1839 0.429 MGCINSKNAVAGALSPSPAMVDIAETVPASTRDHSGLHGYEPKTGSEDERNNKFKKNSSKKSGGSFNFRLGLAQRHVEAEQNAAGWPPWLTAAAAEAIQGWIPLKADSFQKLEKVLYYYVFISIGQGTYSSVFRAREVESGKMYALKKVRFDNFQPESIRFMAREITILRRLDHPNIMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSRPDIVFTESQIKCYMRQLLSGLEHCHMRGIMHRDIKVSNILLNNEGVLKIGDFGLANTISTNNKHQLTSRVVTLWYRPPELLMGSTTYGVSVDLWSVGCVFAELFLGKPILKGRTEVEQLHKIFKLCGSPPEEFWKKTKLPHATMFKPQTNYETSLRERCADFPATAVDLLEILLSIDANNRGTASSALMSEYFSTKPFACSPSILPKYPPSKEMDVKSRDDSSRKKTGGNKMREVATSRRQQRWVGKVLQEPNNVGKSTSKEDMQNIYENAHRDEGKTLLTKGKGGGMYKEHTKPPLDAMSEASQMVNVANGNGYSVPVQVQGSTDAFTWAKRRKQDASSTLSDGSRSKISALDPHFAKGTYDLTNQRVSMDFDPAELINAQGDRDEYGMRRAVRKSRFGRGK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7890g00002 612 Pfam Protein kinase domain 123 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr7890g00002 612 Gene3D Transferase(Phosphotransferase) domain 1 201 441 - -
Mupr7890g00002 612 FunFam probable serine/threonine-protein kinase At1g54610 96 200 - -
Mupr7890g00002 612 MobiDBLite consensus disorder prediction 27 66 - -
Mupr7890g00002 612 MobiDBLite consensus disorder prediction 36 56 - -
Mupr7890g00002 612 SMART serkin_6 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr7890g00002 612 PANTHER CELL DIVISION PROTEIN KINASE 108 407 - -
Mupr7890g00002 612 SUPERFAMILY Protein kinase-like (PK-like) 118 406 IPR011009 -
Mupr7890g00002 612 FunFam probable serine/threonine-protein kinase At1g54610 201 442 - -
Mupr7890g00002 612 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Mupr7890g00002 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Mupr7890g00002 612 Gene3D Phosphorylase Kinase; domain 1 105 200 - -
Mupr7890g00002 612 ProSiteProfiles Protein kinase domain profile. 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr7890g00002 612 MobiDBLite consensus disorder prediction 413 450 - -
Mupr7890g00002 612 CDD STKc_CDK9_like 109 402 - -
Mupr7890g00002 612 MobiDBLite consensus disorder prediction 421 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7890g00002 Mupr-Chr7890 2982 8718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7890g00002 101 434 Core Cell Cycle Gene Families AT5G10270 46.571 1.35e-104 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr7890g00002 Pkinase 3.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7890g00002 - - gmx:100790917 960.674