Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr788g00004 ATGGGTAGAGCTCCTTGCTGTGACAAGGCTAATGTGAAAAAAGGGCCATGGTCACCAGAAGAAGATGCAAAGCTAAAGGACTACATAGAAGAACATGGCACTGGAGGGAACTGGATTGCCCTCCCACAAAAAGTTGGTTTGAAAAGATGTGGCAAGAGCTGTAGACTAAGGTGGCTTAATTATCTTAGACCCAACATTAAGCACGGCCAATTCTCTGATGCAGAAGATAAAATAATCTGCAGCCTCTTTGCTAGCATTGGAAGCAGGTGGTCCATAATAGCGTCTCAGTTGCCAGGGAGGACTGACAATGATATCAAGAACTATTGGAACACCAAACTTAAGAAGAAAATGATGGCCATGAATCCCTCACCACAGAGGAAGCCTCAGCAAATTACCCTTTTGTCCATCCTTCAAAGCTCAACATCATCTTCACCATTGTCATTCAGAGACAACAATTCATACAACCCCCTGCACGGGTCTCTCACAGGCTCCGGGTCCTTTTCCTACTCGTCAAGTCTTGTGAGTGGAAATAACTCTTCTGCTGATTCCTTCTTTCAAGCACAAGAGAGTTTCATGGGCCCCACTCAGAAGTGCCAATTCAAAGATAGCAGCAGCAATAGCATCTTTGTGTTTGGGGGTGAAGCCACCAGTTGCAGCTCCTCTGATGGGAGCTGCAACAACCAGATCAGCCATGTCATGGAGCCAGAGTTTGGTCCTGCAAGTTTTGTTGGGGCTAATAATCTCCACAGTGGGGTGGTGGAAGATGCTACTCACAAGTTCATGTTCTCTAATGATGCTACTGTTAGTGGCTGGACAGACAAACCAAATGGATTGTGGGAACAAAATCCATTGGATTATGGTCTAGAGGAAATTAAACAGTTAATTAGCACTAATAACAGTTGTAACAACTTTTTGTTTGATGACAAGAAGACAGAGGAAAGGGTCACTTACTTTGCC 957 0.4451 MGRAPCCDKANVKKGPWSPEEDAKLKDYIEEHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNPSPQRKPQQITLLSILQSSTSSSPLSFRDNNSYNPLHGSLTGSGSFSYSSSLVSGNNSSADSFFQAQESFMGPTQKCQFKDSSSNSIFVFGGEATSCSSSDGSCNNQISHVMEPEFGPASFVGANNLHSGVVEDATHKFMFSNDATVSGWTDKPNGLWEQNPLDYGLEEIKQLISTNNSCNNFLFDDKKTEERVTYFA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr788g00004 319 SMART sant 67 115 IPR001005 -
Mupr788g00004 319 SMART sant 13 64 IPR001005 -
Mupr788g00004 319 Gene3D - 70 133 - -
Mupr788g00004 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Mupr788g00004 319 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mupr788g00004 319 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mupr788g00004 319 CDD SANT 16 62 IPR001005 -
Mupr788g00004 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Mupr788g00004 319 FunFam Transcription factor RAX3 7 68 - -
Mupr788g00004 319 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mupr788g00004 319 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mupr788g00004 319 Gene3D - 7 68 - -
Mupr788g00004 319 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mupr788g00004 319 PANTHER OS09G0431300 PROTEIN 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr788g00004 Mupr-Chr788 55156 57038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr788g00004 1 127 MYB Transcription Factor Family AT5G57620 81.890 8.35e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr788g00004 Myb_DNA-binding 3.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr788g00004 K09422 - gmx:778084 500.745