Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr787g00003 ATGGCCTCTGCAACACTGCGTCACTGTCATCTTCCTCTTTCTCTTCCTCATTCTCGTCTTTCTATCAGAATTACGAAACCGCCCCTCTCTCTTTCTCTCCCACCCATTCTCACTCACCCTCTCCACTCGCGCTTCTTCTTCCCTCCACCACGCGCCTACGTCACCGCGCCAGTGTCCGACCCGAATTTCGGCGACTCGGATCCGAAACTGGACGGGTTGGATCCGGAGAAGGCGAAGCCGCGGAACGTGATTACTTGGAGCCTCCTCTGCACGCTTCTCATGAAGCACAAACTGCGCCTTGCTCTCGCGGTCGCAACTCTCGTCGCCTGCTCCACCTGTACCCTATCCATGCCCATTTTCTCTGGGCGGTTTTTTGAAGTTCTAATTGGCGCTAGACCTGAGCCGTTATGGAAGCTGCTTAGTAAAATTGGAGTTCTGTATGCCCTGGAGCCACTTTTAACTATTATTTTTGTTATAAACATGAACATAGTGTGGGAGAAAATTATGTCAACACTAAGAGCTCAGATATTTGGAAGAATATTGATTCAGAAGATTGAATTTTTTGACAAATACAAGGTTGGTGAACTCACAGGTTTGTTAACATCTGATTTGGGTTCTCTTAAAGATATTGTCAGTGAGAATGTTTCAAGGGATCGCGGATTCAGGGCATTATCTGAGGCAAGCAACTCTACACCAATGAGAAGTCATCGGAACAATATTCATACTTTTTTCTTTATCCCCGCAACTGGCACCAATTCTGGGTGTTCTGATGCTCGCACTGTCTACAAGAGATCTACTTTGCCGGTTTTTAAGGCACATGGGATGGCCCAAGCATCTATATCTGATTGTGTAACAGAAACATTTTCTGCTATTCGAACAGTAAGATCTTTTGGTGGTGAAAAGCGCCAAATGTTTACATTTGCTAGTCAGGTTTTATCTTTCCAATCAAGTGGGATAAAGCTTGGGACTTTCAAATCTGTAAATGAATCCTTGACTAGAGTTGCTGTTTATATTTCTTTAATAGCATTATATTGTCTTGGAGGAAGCAAGGTTAAGGCGGGTGAGCTCTCTGTTGGAACCATGGCATCTTTTATTGGATATACTTTCACTTTAACATTCGCTGTTCAAGGACTGGTTAATACTTTTGGAGATCTTCGTGGAACTTTAGCTGCTGTTGAGAGGATCAACTCTGTTTTGTCTGGAGTTCAAGTTGACGATGCCCTTGCCTATGGCTTGGAAAGAGAACTGAGACAAAAAACAGTGGATGATGAAAACTATAAATTGGTCTTGTCTAATATTTCTACTGAGAATAACCAAAAAAATATTTTGCATTACATGTCAGCTCTTAAAACATCAAGCAATTTGTATAGCTTAGCTTGGTCCGGAGATATTTGTCTTGAAGATGTATATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATCTTAAGTGGCCTAAATTTAAGGCTAAAATGTGGAACTGTAACTGCACTGGTGGGTCCTAGTGGTGCAGGCAAAAGTACAGTAGTACAGCTATTGTCTAGATTTTATGAGCCAACAAGAGGTTCTATAACAGTTGCAGGAGAGGATGTCCGAACATTTGACAAGAGTGAATGGGCCCGGGTTGTCTCTATTGTAAATCAAGAGCCTGTTCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCTTATGGGCTACCAGATGAAGATGTTTCTAAAGAAGATGTGATTAAGGCAGCGAAAGCTGCAAATGCTCATGACTTTATAATTTCACTTCCACAGGGCTATGATACACTTGTTGGTGAGCGAGGAGGCCTACTGAGTGGAGGTCAGAGACAGAGAATTGCTATTGCCCGAGCTCTCCTAAAGAATGCTCCCATCCTTATACTTGATGAGGCTACCAGTGCCCTGGATGCCGTCAGTGAGCGCTTGGTCCAGGATGCTCTCAACCAATTGATGAAGGGAAGGACGACATTGGTAATAGCTCACCGATTAAGCACAGTCCAAAATGCCTATCAAATTGCAGTCTGTTCTGAGGGGAGGATTGCAGAACTAGGCTCCCATTTTGAGCTATTGGCTAAGAAGGGCCAATATGCTTCACTGGTTGGCACACAAAGGCTTGCATTTGAATAG 2127 0.4349 MASATLRHCHLPLSLPHSRLSIRITKPPLSLSLPPILTHPLHSRFFFPPPRAYVTAPVSDPNFGDSDPKLDGLDPEKAKPRNVITWSLLCTLLMKHKLRLALAVATLVACSTCTLSMPIFSGRFFEVLIGARPEPLWKLLSKIGVLYALEPLLTIIFVINMNIVWEKIMSTLRAQIFGRILIQKIEFFDKYKVGELTGLLTSDLGSLKDIVSENVSRDRGFRALSEASNSTPMRSHRNNIHTFFFIPATGTNSGCSDARTVYKRSTLPVFKAHGMAQASISDCVTETFSAIRTVRSFGGEKRQMFTFASQVLSFQSSGIKLGTFKSVNESLTRVAVYISLIALYCLGGSKVKAGELSVGTMASFIGYTFTLTFAVQGLVNTFGDLRGTLAAVERINSVLSGVQVDDALAYGLERELRQKTVDDENYKLVLSNISTENNQKNILHYMSALKTSSNLYSLAWSGDICLEDVYFSYPLRPDVEILSGLNLRLKCGTVTALVGPSGAGKSTVVQLLSRFYEPTRGSITVAGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDEDVSKEDVIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNQLMKGRTTLVIAHRLSTVQNAYQIAVCSEGRIAELGSHFELLAKKGQYASLVGTQRLAFE 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr787g00003 708 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 101 387 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr787g00003 708 Pfam ABC transporter transmembrane region 102 215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr787g00003 708 Pfam ABC transporter transmembrane region 261 374 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr787g00003 708 Gene3D ABC transporter type 1, transmembrane domain 242 403 IPR036640 GO:0005524|GO:0016020
Mupr787g00003 708 CDD ABC_MTABC3_MDL1_MDL2 464 703 - -
Mupr787g00003 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 703 IPR027417 -
Mupr787g00003 708 ProSitePatterns ABC transporters family signature. 605 619 IPR017871 GO:0005524|GO:0016887
Mupr787g00003 708 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 462 706 - -
Mupr787g00003 708 SUPERFAMILY ABC transporter transmembrane region 89 215 IPR036640 GO:0005524|GO:0016020
Mupr787g00003 708 Pfam ABC transporter 482 633 IPR003439 GO:0005524
Mupr787g00003 708 SMART AAA_5 491 686 IPR003593 GO:0016887
Mupr787g00003 708 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 464 702 IPR003439 GO:0005524
Mupr787g00003 708 Gene3D ABC transporter type 1, transmembrane domain 73 217 IPR036640 GO:0005524|GO:0016020
Mupr787g00003 708 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 69 706 IPR039421 -
Mupr787g00003 708 SUPERFAMILY ABC transporter transmembrane region 261 400 IPR036640 GO:0005524|GO:0016020
Mupr787g00003 708 Gene3D - 462 705 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr787g00003 Mupr-Chr787 19722 26408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr787g00003 461 708 Calmodulin-binding Proteins AT2G36910 54.183 1.82e-74 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr787g00003 K05657 - gmx:100791034 1153.27