Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7872g00002 ATGGATTCAGCTAACTCCCATGTACTTGTTAAACAACTTCCAAGGTCTGTTCAGACTAGCCAGCCAATCTGTTTGGTGGGAAATAACAATTTTAGGCGAAAGTGTCTTGCTTCAATTGGGGCACATGAGATTTTCAGACCAGAGATGTGGAAAGCAGCTCTAACAGAATTAACAGCAACTGCGTCTCTAGTGTTCACCTTGACGACTTCCATTATTGCATGCATGGACTCACACGTGGTCGATCCTAAGCTTCTTGTTCCCTTGGCAGTGTTCATCATAGCCTTTTTGTTCCTACTTGTGACAGTTCCTCTCACTGGTGGCCACATGAGTCCTGTTTTCACATTCATTGCTGCTTTAAAGGGTGTTGTGACTCTAACCCGTGCTCTCATTTACGTGCTAGCACAATGCACTGGCTCAATAATTGGTTTCTTTATACTCAGGACTGTGATGGAGCCAAGATTAGCAGATACATATTCTTTGGGAGGTTGTGCCATCGGTGCTACAAAGGCACAGGATGCTCTGTTAGTGGAATTCACTTGCACATTTGTGGTGCTCTTTGTGGGTGTGACATTGGCATTTGACAAGAAAAGGTCTAAGGATTTGGGCTTGCCAATGGTGTGCATGGTGATAGCAGGAGCCATGGCATTGGCAGTATTTGTGTCCCTCACTGTAACTGGCCGGGCTGGTTATGCGGGCGTGGGCCTCAGCCCAGCAAGATGCTTAGGCCCAGCATTGTTTCATGGAGGCTCGCTTTGGGAAGGCCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCATGCATACTCTATTATGCTCTGTCTGTCAACCTACCAAAGGAGGGTTTGGTTTGGGTTGATGGAGAATATGATGTCTTAAACTTGCCTCTCGCTTCTCCTGGGACTCTCTATAAAACTTCTCTTTCAAATGATGGTCCTGAACGACCAACCGCTGGGTCCATGGATACAGCTAATTCGCATGTAGTAGTTGATATTGGTGACCAATTGCCAAGGGACTTGGTTCATAAGAAATGTTCAGGGCCCAAATTTCTTACCTCCATTGGTGCCCATGAATTTTTCACAATTGAGACGTGGAAAGCAGGTTTGGTAGAGTTAACGGCAACTGCTGCACTAATGTTCAGCCTAACGAGTTCCAATATTGCATGTTTGGAGTCACACGAGGTCAATCCCAGGCTTCTTATTCCCTTTTCAGTCTTCATCATAGTCTTCTTGTTTCTAATTGCCACGGTTCCTCTATCGGGGGGTCACATGAACCCCGTTTTCACATTCGTTGCGGCTTTAAAGGGTGTTGTGACCCTTTCTCGTGCTCTTATTTACGTCTTAGCCCAATGCATTGGCTCAATAATTGGCTTCTTTATACTCAAGACTGTGATGGAGCCAAAATTAACAGATACATATTCTCTGGGAGGTTGTGCCATTGGTCAGAAAGGACAAAGTTCTGCTATAGAGCCACAAGATGCTTTGTTGTTGGAATTCTTTTGCACGTTTTTAGTACTCTTTGTGGGACTAACGTTGGCATTTGATAAGAAAAGGTGCAAGGATTTGGGCTTGCCAATGGTGTGCTTGGTGGTGGCAGGATCCTTGGCACTGGCAGTGTTTGTCTCCATAACTATAACTGGGCGGCCTGGTTATGCAGGTGTCGGGCTGAGCCCGGCAAGATGCTTAGGCCCAGCGTTGCTTCATGGAGGCTCTCTATGGAATGGGCATTGGGTTTTTTGGCTTGGGCCTTTCTTGGCCTGCATAATCTATTATAGTGTCTCCATTAATTTACCAAAGAAGGGTTTGTGTTGGGTAGATGGAGAATATGATATCTTAAATTTGGCTCTGGGTTCTTGCGGGACTATCTCTAACAATGCCGTTTGA 1878 0.4574 MDSANSHVLVKQLPRSVQTSQPICLVGNNNFRRKCLASIGAHEIFRPEMWKAALTELTATASLVFTLTTSIIACMDSHVVDPKLLVPLAVFIIAFLFLLVTVPLTGGHMSPVFTFIAALKGVVTLTRALIYVLAQCTGSIIGFFILRTVMEPRLADTYSLGGCAIGATKAQDALLVEFTCTFVVLFVGVTLAFDKKRSKDLGLPMVCMVIAGAMALAVFVSLTVTGRAGYAGVGLSPARCLGPALFHGGSLWEGHWVFWLGPFLACILYYALSVNLPKEGLVWVDGEYDVLNLPLASPGTLYKTSLSNDGPERPTAGSMDTANSHVVVDIGDQLPRDLVHKKCSGPKFLTSIGAHEFFTIETWKAGLVELTATAALMFSLTSSNIACLESHEVNPRLLIPFSVFIIVFLFLIATVPLSGGHMNPVFTFVAALKGVVTLSRALIYVLAQCIGSIIGFFILKTVMEPKLTDTYSLGGCAIGQKGQSSAIEPQDALLLEFFCTFLVLFVGLTLAFDKKRCKDLGLPMVCLVVAGSLALAVFVSITITGRPGYAGVGLSPARCLGPALLHGGSLWNGHWVFWLGPFLACIIYYSVSINLPKKGLCWVDGEYDILNLALGSCGTISNNAV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7872g00002 625 PRINTS Major intrinsic protein family signature 440 459 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 PRINTS Major intrinsic protein family signature 495 513 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 PRINTS Major intrinsic protein family signature 403 427 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 PRINTS Major intrinsic protein family signature 364 383 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 PRINTS Major intrinsic protein family signature 536 558 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 PRINTS Major intrinsic protein family signature 575 595 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 PANTHER AQUAPORIN-LIKE 340 615 - -
Mupr7872g00002 625 SUPERFAMILY Aquaporin-like 42 268 IPR023271 -
Mupr7872g00002 625 Gene3D Glycerol uptake facilitator protein. 351 596 IPR023271 -
Mupr7872g00002 625 Gene3D Glycerol uptake facilitator protein. 41 279 IPR023271 -
Mupr7872g00002 625 Pfam Major intrinsic protein 359 586 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 Pfam Major intrinsic protein 46 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr7872g00002 625 SUPERFAMILY Aquaporin-like 360 587 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7872g00002 Mupr-Chr7872 12644 16837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7872g00002 406 587 Major Intrinsic Protein MIP AT3G54820 32.086 1.44e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7872g00002 K09866 - gmx:100804160 519.62