Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7871g00003 ATGGCCAAAGAAGGTCTTGGACTTGAAATCACGGAGCTAAGGTTGGGTCTACCCGATGTAGTCAATAAGAATGAGAGGAAGAGGGCGTTCTCGGAGATTGACGGTGTCGCCGATGAAAACAGCTCCTCCGGTGACCGGAAAATCGAGAAGAAGAACCAAGTGGTGGGGTGGCCTCCGGTGTGCTCTTACCGGAAGAAGAACAGCATCAACGAAGCTTCGAAAATGTATGTGAAGGTTAGCATGGATGGGGCTCCTTTCTTGCGTAAAATTGATCTCTCTATCCATAAGGGATACTCTGATTTAGCCTTGGCTTTGGACAACCTCTTTGGTTGCTATGGAATGGTGGAGGCGTTGAAGAATGCAGACAATTCTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTGGTTGGAGACGTCCCTTGGGAAATGTTTATGGAGTCATGCAAGAGGCTGAGGATTATGAAGAGATCAGATGCTAAGGGATTCGGTCTGCACCCTAAAGGATCTTTAAAGGGATTCATAGAAAGCGTGGCAAAGTGA 552 0.4728 MAKEGLGLEITELRLGLPDVVNKNERKRAFSEIDGVADENSSSGDRKIEKKNQVVGWPPVCSYRKKNSINEASKMYVKVSMDGAPFLRKIDLSIHKGYSDLALALDNLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSDAKGFGLHPKGSLKGFIESVAK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7871g00003 183 FunFam Auxin-responsive protein 69 170 - -
Mupr7871g00003 183 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 164 IPR003311 GO:0005634|GO:0006355
Mupr7871g00003 183 Gene3D - 68 170 - -
Mupr7871g00003 183 ProSiteProfiles PB1 domain profile. 74 162 IPR000270 GO:0005515
Mupr7871g00003 183 SUPERFAMILY CAD & PB1 domains 68 159 - -
Mupr7871g00003 183 Pfam AUX/IAA family 40 166 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7871g00003 Mupr-Chr7871 21831 24496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7871g00003 6 181 B3 DNA Binding Superfamily AT4G23980 28.090 3.60e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr7871g00003 AUX_IAA 2.4e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7871g00003 K14484 - gmx:547784 324.709