Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7871g00001 ATGAGGAAAGAAAACAGTTCTATGCTGAAAGCTGGGGAGGTCCCTGGTCGATTGACTCGTGCTCGAGCTGCTGCTGCTGCTTCTCGCGCATCTGGACAGCTACTCCCATTGAAAGAGGGAGCACATGAAAATCAGAAGCAGTTATCCAGAGTCAATTCAAAAAGAGCAGTTTCTGACAATGCATGTCTTCAACGTAAAAAGAGGGCTGTTCTTCAGGAAGTTACTAATGTTTGCTGTGAAAATGCATACAAGGGTTGTTTCAACTCAACAAAAATTCAGGCTAAGAAAAGCAAGCTGGCTAAGGCTGGTCAAATTAGTGTGTCCAAAGCCGCTCCTTCTGTTGCTGTGGAGCCACAACAGTTTGAAGTTGACTTCAAAGGGAAGAGTTTACAGGAAACAGCATTGAAATCGGAAGATACCTTGTGCTCAGTTAATTTGGAAAACAATGACCATCCACGGCTGAGTACCAACGAGTGTAACAAGGATTTTAGACTGCCTGAAAGTCAAATGTCTGGAATATCTGCTCATTCTTTGATTTCTCAGAAGAAAGACAAGAAAGATAACCTTTCGAAACTTTTGCCTGCATTGAAGGATCCAGAAATCACTAATATAGATTATGATCTTGAAGATCCTCAATCGTGCAGCCTATATGCTGCTGAGATCTATGACACTATGCGTGTTGCTGAGCTTGCAAGAAGGCCTTATCCTAACTTAATGGAGACAGTGCAGCGAGATATTACTCAAAGCATGCGAGGAATTCTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAGTTGGTTACAGACACTCTTTACCTCACTGTCTATCTCATAGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAAAGACTTCAGCTACTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCACGTATTGAAGATTTCTGCTTCATCACTGACAATACATATACGAAAGCTGAGGTACTAAAAATGGAGAGTCAAGTGTTAAAGTCGTCTGAATATCAACTGTTTGCTCCCACCACACAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCATACAAGGACCCCTGCCTTGAATTGGAGTTCCTGGCCAATTACCTAGCTGAACTAACACTGATGGACTATGGTTTCTTAAATTTCCTTCCCTCTATCATTGCTGCATCAGCTGTTTTTCTTGCCAGGTGGACACTGGATCAGTCAAACCACCCATGGAATCCAACTCTTCAACACTATGCCTGCTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGACCTACATCTGAATACTGAGGGATGCCCTCTAACTGCCGTCCGCACAAAATACAGACAAGACAAGCGGCTTTGTCTTCACCAAAACTGCTTGAGACTTTGTTCT 1425 0.426 MRKENSSMLKAGEVPGRLTRARAAAAASRASGQLLPLKEGAHENQKQLSRVNSKRAVSDNACLQRKKRAVLQEVTNVCCENAYKGCFNSTKIQAKKSKLAKAGQISVSKAAPSVAVEPQQFEVDFKGKSLQETALKSEDTLCSVNLENNDHPRLSTNECNKDFRLPESQMSGISAHSLISQKKDKKDNLSKLLPALKDPEITNIDYDLEDPQSCSLYAAEIYDTMRVAELARRPYPNLMETVQRDITQSMRGILVDWLVEVSEEYKLVTDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMESQVLKSSEYQLFAPTTQTFLRRFLRAAQASYKDPCLELEFLANYLAELTLMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLQHYACYKASDLKTTVLALQDLHLNTEGCPLTAVRTKYRQDKRLCLHQNCLRLCS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7871g00001 475 Pfam Cyclin, C-terminal domain 349 465 IPR004367 -
Mupr7871g00001 475 MobiDBLite consensus disorder prediction 1 52 - -
Mupr7871g00001 475 FunFam Cyclin A1 336 467 - -
Mupr7871g00001 475 Gene3D - 220 463 - -
Mupr7871g00001 475 SMART cyclin_7 256 340 IPR013763 -
Mupr7871g00001 475 SMART cyclin_7 353 441 IPR013763 -
Mupr7871g00001 475 PANTHER CYCLINS 176 459 IPR039361 -
Mupr7871g00001 475 SUPERFAMILY Cyclin-like 349 465 IPR036915 -
Mupr7871g00001 475 Pfam Cyclin, N-terminal domain 220 345 IPR006671 -
Mupr7871g00001 475 SMART Cyclin_C_2 349 470 IPR004367 -
Mupr7871g00001 475 SUPERFAMILY Cyclin-like 209 345 IPR036915 -
Mupr7871g00001 475 CDD CYCLIN_AtCycA_like_rpt1 210 345 - -
Mupr7871g00001 475 Gene3D - 234 347 - -
Mupr7871g00001 475 FunFam Mitotic cyclin 6 234 334 - -
Mupr7871g00001 475 CDD CYCLIN_AtCycA-like_rpt2 349 462 - -
Mupr7871g00001 475 PIRSF Cyclin_A_B_D_E 19 468 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7871g00001 Mupr-Chr7871 2101 6968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7871g00001 1 462 Core Cell Cycle Gene Families AT1G80370 52.553 4.69e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7871g00001 K06627 - gmx:100789757 761.911