Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr786g00003 ATGGAGAAGGTGAATTTTGTGAAGAATGGGGAGCTTAGATTGCCTCCAGGGTTCCGTTTCCACCCGACTGATGAGGAATTAGTTGTGCAATACTTGAAACGTAAGGTCTTTTCCTACCCTTTGCCAGCATCTATCATTCCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGGTGATTTGGAGCAAGAGAGGTACTTCTTCAGCACCAAAGAGGCCAAATATCCTAACGGCAATCGATCCAACAGAGCCACCAATTCTGGTTATTGGAAAGCAACTGGGTTGGACAAACAAATAATAACTTCAAAAGGGAACCAGCTTGTGGGGATGAAGAAGACACTTGTTTTCTACAGAGGCAAGCCACCTCATGGCTCAAGAACTGATTGGATCATGCATGAATATCGCCTCCACTCTCAGAGTCCTGCGGTTCCCATGGAAAACTGGGTTCTATGTCGCATATTTTTGAAGAGGAGAAGTGGTGCTAAAAATGGGGAGGACAGTTGCGTTAAGGTGAGGAACTCTAGTGTGGTTTTCTACGACTTCTTGGCTCAGAACAAGACAGATTCCTCATCAAGTGGAATTACAGAGGTTTCCACCCATGAAGAATCAGACGAACTTGAAGAGAGCAGTAGCTCTAACACCTTCCCTTATTTTAGAAGAAAACCTTGA 678 0.4469 MEKVNFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSYPLPASIIPEVDVCKSDPWDLPGGDLEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIITSKGNQLVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHSQSPAVPMENWVLCRIFLKRRSGAKNGEDSCVKVRNSSVVFYDFLAQNKTDSSSSGITEVSTHEESDELEESSSSNTFPYFRRKP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr786g00003 225 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Mupr786g00003 225 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mupr786g00003 225 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 192 - -
Mupr786g00003 225 MobiDBLite consensus disorder prediction 190 225 - -
Mupr786g00003 225 ProSiteProfiles NAC domain profile. 14 159 IPR003441 GO:0003677|GO:0006355
Mupr786g00003 225 Gene3D NAC domain 23 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr786g00003 Mupr-Chr786 39865 40702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr786g00003 1 166 NAC Transcription Factor Family AT5G13180 79.167 1.42e-97 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr786g00003 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr786g00003 - - gmx:100170709 379.793