Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7850g00005 ATGAGAAAAGATGATGAAGAGTTTGATGTAACAAAAACCATGTCTAATTTGACTTCTCCATCCGGTGAAGCTAGTGCTTCTTCAGGCAACAGAACCGAAATTGGCACTGATTACTCACAGCAATACTTTGCTCCACCACCAACTCAAACCCAGCCTCCACTAAAGAAAAAGAGAAACCTTCCAGGCAACCCAGACCCGGAAGCTGAAGTTGTCGCGTTGTCTCCAAAGACTCTCTTGGCCACGAATAGGTTCGTTTGTGAGATCTGTAACAAAGGGTTTCAAAGAGACCAGAATCTTCAGCTTCACAGAAGAGGACACAACTTACCATGGAAGCTGAAGCAGAGAACAAGCCAAGAGATAAGGAAGAAGGTGTATGTGTGCCCAGAAGCCACTTGCGTGCACCACGACCCTTCAAGGGCCCTGGGGGACCTAACTGGTATCAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGTGACAAGTGCTCCAAGAAGTATGCTGTTCAATCAGACTGGAAAGCCCACTCCAAGACCTGTGGCACAAGAGAGTACAGATGTGACTGTGGAACCCTCTTCTCAAGGAGGGACAGTTTCATAACCCACAGAGCCTTCTGTGATGCACTAGCAGAGGAGAGTGGAAGATCTGTGACAGGAATAGGCATAGGCATAGGCAACTCAGCTCCTCATCAAGTAGGTGCAGTAGGAGTAGTGATTCCTTCAGCCTCTGAATCTCATCAAGAAGACATCCATGGTAGTTTCTCATTGAAGAAAGAGCAACAAAGTTTCATGCCCCCTTGGCTTGAAGCAGTCCCCACCGTTGATCTATCTCCCTCTTCCTCCTCAATATTCTTCTCTCCTGAGAGTCTCCAGGAAAACCCTAACCCTAGAGGTGGCCCCACTCTTCTTCCTCCCTACCAAACAGCGCCTTCCTCTCCTCACATGTCAGCCACAGCGTTGCTGCAGAAAGCGGCACAAATGGGTGCAAGCATGAGCAAAACCGGCTCCATGATTAGGACCCACCAACAGACTCACGTGTCTGCTGACTCTGGCAATTTGTCCTCACGTGAAGACCAGATGATCCCCACTTCCAATGCCACACCCCATGGCTCGGTACCTTTCGGGAATAAAGCTGTTGGTGTTTCCCCATCACTCCTTCACCATGTTATCAACTCTTTCTCTTCTCCCTTTGAAGGGACTTCTTTTGAGGGCATGACCAAAACAACCACCGCTGATGGCGCCGGAGGAAATAGTGAAGCCTTGACCAGAGATTTTCTGGGTCTTAGACCCCTCTCTCACACTGATATCCTCAACATTGCTGGCATGGGACACTGCATGAACTCCTCCCAACATAACCAAACCCAAAACCCTTGGCAAGGTTAG 1389 0.4888 MRKDDEEFDVTKTMSNLTSPSGEASASSGNRTEIGTDYSQQYFAPPPTQTQPPLKKKRNLPGNPDPEAEVVALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSQEIRKKVYVCPEATCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESGRSVTGIGIGIGNSAPHQVGAVGVVIPSASESHQEDIHGSFSLKKEQQSFMPPWLEAVPTVDLSPSSSSIFFSPESLQENPNPRGGPTLLPPYQTAPSSPHMSATALLQKAAQMGASMSKTGSMIRTHQQTHVSADSGNLSSREDQMIPTSNATPHGSVPFGNKAVGVSPSLLHHVINSFSSPFEGTSFEGMTKTTTADGAGGNSEALTRDFLGLRPLSHTDILNIAGMGHCMNSSQHNQTQNPWQG 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7850g00005 462 FunFam protein indeterminate-domain 12-like 63 131 - -
Mupr7850g00005 462 MobiDBLite consensus disorder prediction 12 45 - -
Mupr7850g00005 462 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Mupr7850g00005 462 SMART c2h2final6 84 106 IPR013087 -
Mupr7850g00005 462 SMART c2h2final6 160 180 IPR013087 -
Mupr7850g00005 462 SMART c2h2final6 125 155 IPR013087 -
Mupr7850g00005 462 SUPERFAMILY beta-beta-alpha zinc fingers 83 180 IPR036236 -
Mupr7850g00005 462 Gene3D Classic Zinc Finger 63 134 - -
Mupr7850g00005 462 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 106 IPR013087 -
Mupr7850g00005 462 MobiDBLite consensus disorder prediction 289 315 - -
Mupr7850g00005 462 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 36 450 IPR031140 -
Mupr7850g00005 462 MobiDBLite consensus disorder prediction 1 67 - -
Mupr7850g00005 462 Gene3D Classic Zinc Finger 138 216 - -
Mupr7850g00005 462 FunFam protein indeterminate-domain 5, chloroplastic-like 138 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7850g00005 Mupr-Chr7850 48356 50361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7850g00005 10 451 IDZ Gene Family AT1G55110 50.976 5.93e-134 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr7850g00005 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7850g00005 K25870 - gmx:100819692 676.781