Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7849g00002 ATGGCTCTTCCTGGTTCCCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGGCTGCAATAAGCATTCGAGGGCAACGGGACGTGACAAGTTACATTTATTTAGTGCAGGTCCTTCATATCCTATTTTGTTCATGAAACAGGAGTGGAGGGGTTTTCAACACCTTCGTCATATAAACAGGCCAACACATACATTATCTTGCAAATCCCGCTCTTTTAAGTGCCATTGTTTTTTAGTGTCAGGCAAACCAAATGAGCTTCCTGCTGTTAAGGTGGCCGCTACAGTGTTGGCTAGGTCTTGTAATGTGTTGCAAAATAGTCCTATCATAGTAAAGTTGATTCCTGCAGTTGGCGTTATCATTTTTGCAGTATGGGGTGTTGGTCCATTATTGTTTCAGACAAGGAAATTATTTTTTCAGAGGAGTGATAATAGTTGGAAGAAAAGTACCACTCACTATATAGTAACTTCTTACCTTCGGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGAGCATTGGAGCCATTAGTTCTACCTTCAGAAACTGGCCAGGTTGTTAAGGAACGGCTTTTGAATTTTATAAGATCATTGTCAACGGTACTGGCCTTCGCCTATTGTTTGTCAAGTGTAATTCAACAAGCGCAGAAATTCTTAGCAGAGGGTACTGATGCAAGTGAGGCGAGAAATATGGGATTCCAATTTGCAGGCAAAGCTGTTTATTCTGCGGTATGGATTGCTGCCTTTTCATTGTTCATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTCACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCTGGCCGTGAGATATTTACAAACTTCCTTTCGAGTGTGATGATTCACGCAACTCGGCCTTTTGTGGTTAACGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACTGTTGAGCATGTTGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTAAATGTCGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCTCTTTTGATTCTGGTGTCTTGTTTTGTTAAGACCTCACATTTTGAAGAATATCTGTGTGTTAAGGAAGCTATACTGTTGGATCTTCTTAGAGTTATCGGCCATCACCGAGCCCGACTTGCAACACCGGTCCGTACCCTGCAGAAAATATACAGTAGTGATGCTGACTTGGAGAACATACCATTTGCAGATTCCACATTTGGTCGTGGTGCCGGGACAGTACCTAACCGTCCATTATTAGTGATTGAACCATCTTACAAGATCAATGGCGACGATAAGACAAAAAGTCGACTGGCACGACCCGTGGTTGATCAAGATAACAAGACAGCTGCGCGAACCAAACCTGACACCAAGACAGACAATATGGTTAGAGAAACTGAAGATGCCACTGAGGTGGATACCAAAGTTGTGACATCTAACTCTGATGCAAATGGAAACTCCAAGACAGTTGTGACACCCAGATCTGAGCCTGAAGTGGGTGAAAACAAGCCACTGAAATCAGATTCAAAGGAAAACATGGAGGTACCAGAATCTTCTAAATCCAAAGTAACTGGTTTGGTAATAGATAATTCAGCCCAAAAGGATATAGATGCCAAACAATCAAAGGGTCAGACCACTAAAAACTTAAAGCCAAATATTGACTCTGACAATGTAGTGTCCTCAACTAGCAATATGAATATGCCAACAAAACTTCAAGGGGAAAAGAAACCTGCTGCACAGCCTCCTGCATCCAGGCCTGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCCATTGATGAGGAGATTGAGAATGTGACACCTCGAGAGACAAAGGAAATGGCTTCCTTCCAGGGTGGAAATGGATCTCCAAAGGTTCCAGATGGAACTGACAAGTAG 2133 0.4257 MALPGSLQLSHGLGLCRNLGCNKHSRATGRDKLHLFSAGPSYPILFMKQEWRGFQHLRHINRPTHTLSCKSRSFKCHCFLVSGKPNELPAVKVAATVLARSCNVLQNSPIIVKLIPAVGVIIFAVWGVGPLLFQTRKLFFQRSDNSWKKSTTHYIVTSYLRPLLLWTGAILICRALEPLVLPSETGQVVKERLLNFIRSLSTVLAFAYCLSSVIQQAQKFLAEGTDASEARNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSSDADLENIPFADSTFGRGAGTVPNRPLLVIEPSYKINGDDKTKSRLARPVVDQDNKTAARTKPDTKTDNMVRETEDATEVDTKVVTSNSDANGNSKTVVTPRSEPEVGENKPLKSDSKENMEVPESSKSKVTGLVIDNSAQKDIDAKQSKGQTTKNLKPNIDSDNVVSSTSNMNMPTKLQGEKKPAAQPPASRPVLEENIVLGVALEGSKRTLPIDEEIENVTPRETKEMASFQGGNGSPKVPDGTDK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7849g00002 710 Gene3D - 299 354 IPR023408 -
Mupr7849g00002 710 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
Mupr7849g00002 710 MobiDBLite consensus disorder prediction 502 656 - -
Mupr7849g00002 710 Pfam Mechanosensitive ion channel 240 446 IPR006685 GO:0016020|GO:0055085
Mupr7849g00002 710 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 694 IPR045042 -
Mupr7849g00002 710 MobiDBLite consensus disorder prediction 569 587 - -
Mupr7849g00002 710 MobiDBLite consensus disorder prediction 607 640 - -
Mupr7849g00002 710 MobiDBLite consensus disorder prediction 543 563 - -
Mupr7849g00002 710 Gene3D - 193 297 - -
Mupr7849g00002 710 MobiDBLite consensus disorder prediction 677 710 - -
Mupr7849g00002 710 MobiDBLite consensus disorder prediction 502 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7849g00002 Mupr-Chr7849 15624 23579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7849g00002 9 710 Mechanosensitive Ion Channel Family AT5G10490 57.504 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7849g00002 K22047 - gmx:100789444 1252.27