Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7841g00001 ATGGGTTTGATGGAGTGCAATGTGGAGGACAATAGGAATCTATACCTTCATGCTCCTACTTTCATTGAGTGGCTCAAACCATGTTCTTCTCCTCCTTCATATCTAAATTCCAATACAATAATACCATCATCACCATCTTCTTATTCTTCTACTAGGAATGAGTTTGTTCAGGAAACTATCCAATTCTTGCCAATTTTAAGTGAAAAGGCCTCAAACTATGAGGCCTCAGATCATGGAGTGAAAGAGGAAAGGGTTGAGCAAGTGGCTGTGGCTTTGCACATTGGATTGCCTGACACTAAAGGGCATGATGAGGTTGGTGATGATCATGAGAAGGTGATTTTCCATGTTAAGGAAGAAGAAGAGTCCTTGAAGAGAAGCTTCCATGGATGCTCCTTTAACCAAGAGAGAAGGTTTTGGATTCCAACTCCTGCTCAGATCCTTGTTGGCCCGATGCAGTTTGCTTGCTCCATATGTAGCAAAACCTTTAATAGGTATAACAACATGCAGATGCATATGTGGGGACATGGATCAGAATTCAGGAAGGGACCAGACTCACTGAAAGGAACACAACCAGCTGCAATGTTAAGGTTACCATGCTACTGCTGTGCCCAGGGTTGCAAGAACAACATCAACCATCCAAGAGCCAAGCCATTGAAGGACTTTAGAACCCTCCAAACGCATTACAAAAGAAAGCACGGCACAAAGCCGTTTATGTGCAGAAAATGTGGGAAAACATTTGCAGTCAAAGGGGATTGGAGGACTCACGAGAAGAACTGTGGCAAGTTGTGGTATTGTACTTGTGGCTCAGATTTCAAGCACAAAAGATCACTTAAGGATCATATTAGATCCTTTGGAAAGGGACATAGCCCTCATCCTGCTTTTGAAGCTTTTGAGGATGAGAAGGAATGCATTACTGCCTCTGATGAAGATGAAGTTAATAATGCTCATCATACATGA 957 0.4253 MGLMECNVEDNRNLYLHAPTFIEWLKPCSSPPSYLNSNTIIPSSPSSYSSTRNEFVQETIQFLPILSEKASNYEASDHGVKEERVEQVAVALHIGLPDTKGHDEVGDDHEKVIFHVKEEEESLKRSFHGCSFNQERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRKGPDSLKGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPAFEAFEDEKECITASDEDEVNNAHHT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7841g00001 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 153 180 IPR013087 -
Mupr7841g00001 318 FunFam Zinc finger protein WIP2 206 288 - -
Mupr7841g00001 318 Pfam Zinc finger, C2H2 type 153 172 IPR013087 -
Mupr7841g00001 318 PANTHER ZINC FINGER PROTEIN WIP2 30 309 IPR043584 GO:0003700|GO:0010468
Mupr7841g00001 318 Gene3D Classic Zinc Finger 152 175 - -
Mupr7841g00001 318 SUPERFAMILY beta-beta-alpha zinc fingers 128 176 IPR036236 -
Mupr7841g00001 318 SUPERFAMILY beta-beta-alpha zinc fingers 223 257 IPR036236 -
Mupr7841g00001 318 SMART c2h2final6 153 175 IPR013087 -
Mupr7841g00001 318 SMART c2h2final6 200 232 IPR013087 -
Mupr7841g00001 318 SMART c2h2final6 237 257 IPR013087 -
Mupr7841g00001 318 ProSitePatterns Zinc finger C2H2 type domain signature. 155 175 IPR013087 -
Mupr7841g00001 318 Gene3D Classic Zinc Finger 215 290 - -
Mupr7841g00001 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 237 257 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7841g00001 Mupr-Chr7841 10187 13853 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7841g00001 7 306 C2H2 Transcription Factor Family AT1G08290 57.692 4.25e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr7841g00001 zf-C2H2_6 0.00014 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7841g00001 - - gmx:100802773 583.948