Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7840g00006 ATGCAGAAGGACAAGGAAGTTGTTACCAAAGAGGGTAAGAATATTGAAATGGATGGGACTCGTGAGAAGGAGGAAACCCTACCACCGGGATTTCGGTTTCACCCCACCGATGAAGAACTCATCTCTTACTATCTCACAAACAAGATTTCAGATTCTAATTTTACAGGAAAAGCAATAGCTGATGTAGATCTCAACAAATGTGAGCCATGGGAGCTTCCGGGGAAGGCGAAGATGGGGCAAAAAGAATGGTACTTCTTCAGTCTAAGAGATCGTAAATACCCGACAGGTGTGAGAACCAACCGAGCAACGAACACGGGGTATTGGAAAACCACAGGGAAAGACAAGGAGATCCTCAACAGTGTTACATCGGAGTTGGTCGGTTTGAAGAAAACTTTGGTTTTCTACAAAGGCAGGGCTCCCAGAGGAGAAAAAACCAACTGGGTCATGCACGAATATCGCATTCATCCAAAATCCACCTTTAGAACCAACAAGCACTCATCTCATACACAGCAGGATGAATGGGTGGTTTGCCGGGTATTCCGCAAGAGTGCTGGTGCAAAAAAGTTCCCCTCTAATTCCAACCACACTAGGGCAACGAATCCTTACAATCTGGAAGTTGGTCCTAGCATGGTGCCACCACCAATGATGAACCTGGGAGATCCTGCTGCTCATTTCCTCTATGGAAGAAACTACATGATGAGCAGTGCAGAGGTAGCTGAAGTCACTAGGGTCTTGAGAGCTGGTGGATCCACCAGTGTGATGAACATGAACCTACCAATGCAGTACTCTCATTTGAACAACCCAGTAGCAGCAGCAGCAGCTGGAGGATTCACCATTTCTGGTCTTAATTTGAATCTGGGAGGAGGAACAGTTGCTGCCACCACCACCACACAAACACAACCCTTTTTGAGGCCAATAATGCCACCACCACAGCCACCTCCTTCTCACACAATGCCCCAAGTGCATGATTTCAATTCCAATATGGTAACACCCAATGCCCTTTCTGCACCCAGTGTGGGGTATGGTGCAGATATGAGCAGTGCAAATTCTCATGGCAATAGGTTCATGGGTATGGACCATTGCATAGATCTAGACATTTTCTGCATGAAACTTACAAATTTGTGGATCTTGGATAATGCAGCCAATCGAGATACAAAACTTGGACGTAAAATGGTGTACATTTATTCAATGCAGCATCACAGGATCCTATGTACAGAATAG 1221 0.4562 MQKDKEVVTKEGKNIEMDGTREKEETLPPGFRFHPTDEELISYYLTNKISDSNFTGKAIADVDLNKCEPWELPGKAKMGQKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELVGLKKTLVFYKGRAPRGEKTNWVMHEYRIHPKSTFRTNKHSSHTQQDEWVVCRVFRKSAGAKKFPSNSNHTRATNPYNLEVGPSMVPPPMMNLGDPAAHFLYGRNYMMSSAEVAEVTRVLRAGGSTSVMNMNLPMQYSHLNNPVAAAAAGGFTISGLNLNLGGGTVAATTTTQTQPFLRPIMPPPQPPPSHTMPQVHDFNSNMVTPNALSAPSVGYGADMSSANSHGNRFMGMDHCIDLDIFCMKLTNLWILDNAANRDTKLGRKMVYIYSMQHHRILCTE 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7840g00006 406 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Mupr7840g00006 406 MobiDBLite consensus disorder prediction 1 31 - -
Mupr7840g00006 406 Gene3D NAC domain 36 186 IPR036093 GO:0003677|GO:0006355
Mupr7840g00006 406 SUPERFAMILY NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
Mupr7840g00006 406 FunFam NAC domain-containing protein 100-like 36 186 - -
Mupr7840g00006 406 ProSiteProfiles NAC domain profile. 27 182 IPR003441 GO:0003677|GO:0006355
Mupr7840g00006 406 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7840g00006 Mupr-Chr7840 17577 22058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7840g00006 21 367 NAC Transcription Factor Family AT2G24430 49.322 2.03e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr7840g00006 NAM 1.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7840g00006 - - gmx:100811175 565.459