Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7839g00003 ATGGCAACAATTACAGAAATGTTTAGCGACGAAGAGCTTATGAAAGCACTTGAGGCTTCTATGAAAAGTGATTCATGTAGCACTTGTTATTGTTGTTATTCTTCTTCTTCACCGAACTTGTCCTTGTCCTCAAGCCAGGCTAGTTCCATCAAGCTAAACCAACTCACCCCATGTCAAGTATTTCAGATTCAAGCCCAAATCCAGGTTCCACGAGGCCAAAACAGGTTGCTGGGCCCAAAGGCCATTCCGATGAAGCCCAGGAAGCTTTACCGTGGGGTGAGGCAGAGACAGTGGGGCAAGTGGGTGGCTGAGATCAGACTCCCGAAGAATCGTACCCGTCTGTGGCTGGGCACATTCGATACCGCAGAGGAAGCAGCATTGGGATACGACAACGCAGCGTTTAAGCTAAGGGGTGAAAACGCGAGGCTCAACTTTCCTCACCTACGTCACCACGAGTTTGGGGAATACAAGCCTCTTCCCTCGGCGGTGGAGGCGAAGCTCCAAGCCATTTGTGAAAGCATGGTCAATTCGCCAGAAAAGCTTAAGACACAGACACGCAAGGAAGAAACAGAAACATCGGAGTTGGAGAACCAAACATCCTCGGCCTTGTCGGATGAATCTTTTGCTGGTTCCTCTTCGCCTGAATCGGATATTACTTTCTTGGATTTCTCGGATTCTTATGGAACGGACTATCTTGGGTTGGATTTGGAAAAGTACCCTTCGGTGGAGATTGATTGGGCAGCTCTATCTGAGTCGTTTGTTTTGTTAGCAGGTGCAATTCAATTTTTGACGGTTGCAGTTGCTAAGTCAGGTTGCAAAGTTTAG 825 0.4788 MATITEMFSDEELMKALEASMKSDSCSTCYCCYSSSSPNLSLSSSQASSIKLNQLTPCQVFQIQAQIQVPRGQNRLLGPKAIPMKPRKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFDTAEEAALGYDNAAFKLRGENARLNFPHLRHHEFGEYKPLPSAVEAKLQAICESMVNSPEKLKTQTRKEETETSELENQTSSALSDESFAGSSSPESDITFLDFSDSYGTDYLGLDLEKYPSVEIDWAALSESFVLLAGAIQFLTVAVAKSGCKV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7839g00003 274 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Mupr7839g00003 274 Pfam AP2 domain 90 139 IPR001471 GO:0003700|GO:0006355
Mupr7839g00003 274 MobiDBLite consensus disorder prediction 195 215 - -
Mupr7839g00003 274 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Mupr7839g00003 274 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Mupr7839g00003 274 MobiDBLite consensus disorder prediction 179 215 - -
Mupr7839g00003 274 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Mupr7839g00003 274 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Mupr7839g00003 274 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Mupr7839g00003 274 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 250 - -
Mupr7839g00003 274 CDD AP2 88 148 IPR001471 GO:0003700|GO:0006355
Mupr7839g00003 274 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7839g00003 Mupr-Chr7839 32598 33494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7839g00003 11 251 AP2-EREBP Transcription Factor Family AT4G39780 53.435 1.12e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr7839g00003 AP2 5.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7839g00003 K09286 - gmx:106796800 309.686