Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7836g00001 ATGCGTCACTTAACTTATGATTATAAATTCTCTATATGCATATGTACACTTCAAAGTGAGTCTCTATCACACATGCACCAGAAAGAAAAACATACCATGGATGAAGAGGGTTCAAGAGGAAAAACCAAAGATGAAGAAGAGCAAGTTAAGTACAGAGGGGTACGTAGGAGGCCATGGGGAAAATTTGCAGCAGAGATTCGTGACTCAATGAGAAATGGTCAAAGGTTGTGGCTGGGAACTTTCAGCACAGCAGAGGAAGCAGCTAGAGCCTATGACAGAGCTGCATATGCCATGAGGGGTCCCTTTGCAGTCCTCAATTTCCCTGATGAGTACCCTCCCTCAGCAGGTGCTGCTCCCTCTTCTTCTGCTTCAGCTTCATCAGCATCTGCACCCTCTTCAAGTCATGGACATGTGGAAGTAAGAGGGAGGGGTGAGCAAGCAGATCAAGTGTTTGAGTTTGAGTACTTTGATGACAAGTTGTTGGAGGACCTTCTTGGTTATGATGAAAAAAACAAACATGACAAAGTTCATAACGTGTCAGGTGGAGATGTATCAGATCACGTGGTTCGTGAGGCACATGTCCTCTTCCGTGTACCGGAATGTATGTCGGTTACAAGAAAGCATTTAACTCGAATGGTTGTTCGGACATCCCGACTTAAACATGTTAGTTCCTGTCACAACCTAAATTGTGACGTTGGGCGGAGTCGGCCGAAACCGAGTCGGCCAGGTAGGAGTCGCCACCGGCGTTTTTGTTTAGGGAACGCCAGGAAACCTTTTGGCAAGGCTGGTCTCGAATCAGACATGTGGGTTCGGGAGTTG 819 0.4664 MRHLTYDYKFSICICTLQSESLSHMHQKEKHTMDEEGSRGKTKDEEEQVKYRGVRRRPWGKFAAEIRDSMRNGQRLWLGTFSTAEEAARAYDRAAYAMRGPFAVLNFPDEYPPSAGAAPSSSASASSASAPSSSHGHVEVRGRGEQADQVFEFEYFDDKLLEDLLGYDEKNKHDKVHNVSGGDVSDHVVREAHVLFRVPECMSVTRKHLTRMVVRTSRLKHVSSCHNLNCDVGRSRPKPSRPGRSRHRRFCLGNARKPFGKAGLESDMWVREL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7836g00001 273 SMART rav1_2 50 114 IPR001471 GO:0003700|GO:0006355
Mupr7836g00001 273 PANTHER DNA-BINDING DOMAIN 38 168 IPR044808 GO:0003700|GO:0009873
Mupr7836g00001 273 MobiDBLite consensus disorder prediction 117 134 - -
Mupr7836g00001 273 MobiDBLite consensus disorder prediction 26 50 - -
Mupr7836g00001 273 CDD AP2 50 109 IPR001471 GO:0003700|GO:0006355
Mupr7836g00001 273 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Mupr7836g00001 273 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Mupr7836g00001 273 ProSiteProfiles AP2/ERF domain profile. 50 108 IPR001471 GO:0003700|GO:0006355
Mupr7836g00001 273 FunFam Ethylene-responsive transcription factor 2 50 109 - -
Mupr7836g00001 273 Pfam AP2 domain 50 100 IPR001471 GO:0003700|GO:0006355
Mupr7836g00001 273 SUPERFAMILY DNA-binding domain 50 110 IPR016177 GO:0003677
Mupr7836g00001 273 Gene3D AP2/ERF domain 49 109 IPR036955 GO:0003700|GO:0006355
Mupr7836g00001 273 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7836g00001 Mupr-Chr7836 153 2544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7836g00001 45 172 AP2-EREBP Transcription Factor Family AT3G23230 56.250 1.93e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr7836g00001 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7836g00001 - - gmx:100775830 182.185