Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7832g00003 ATGCTCGCGCCTCTTTCTCTTACTCTAATCACCACCATCTTCTTCACTTCTATTTTCCTCTCTTCTTTGGAACTGAAATCTCAGTCTCTTCAAAACAATTTTAGATTCTCAGTTTTGACTGGAATACTGATTGTGGGCAATGAAACAGAACTCGGGGTTTGTGGGGGTCTAATCACGTTTGAACGGGCAAACATCACGTTTGAACGGGCAAACCCTAAACATCACAACTACACGAGATTTCAGTACATATCCTCTAGCAACAACATGGATCAAAACGAGCATGGTGAAGCAGCAAGAGAGGTTGGTGCTCGAGCACAAGCACCACGTGGCAAGAACCGGTATCAATCCAACCTAATGATGGCACCAACCAATCCTCCAACTCGCGCTTTTGATCCTTCTGTCCTTATATTCTTCCCAAGAGACCAAAAAGATGGTCCTCAATACTTCTACATCCCACAACTGGACCACTTGAAGCAACGACTCAAAAACTTCTGGGCAAAACAGCGCCAGGAAATTGAGGAGGGCACTGAATTAAGGCCTAACAGCTTGCCTTTGTGTAGGATTAAGAAGATCATGAAGGTTGATGAGGAAGTGAAGATGATATCAGCAGAGGCTCCTGTGGTGTTTAGGAAGGCATGTGAACTGTTCATTATGGAGCTCTCAATGAGGGCTTGGGATATTACTGAAAAGAACAAGAAGAAGACACTTCAGAAGAGTGACATTGCATCTGCAATCACAAAGACTGATGTGTTTGATTTTCTTGTTGATATTGTCCCTAGGCATGACACAATGGAGCCAGGAGAGATTTCAGGGTGGTATCTAGTTCGTGTGTTTTTTGTGTGGATGGTGTTAACCTAG 858 0.4371 MLAPLSLTLITTIFFTSIFLSSLELKSQSLQNNFRFSVLTGILIVGNETELGVCGGLITFERANITFERANPKHHNYTRFQYISSSNNMDQNEHGEAAREVGARAQAPRGKNRYQSNLMMAPTNPPTRAFDPSVLIFFPRDQKDGPQYFYIPQLDHLKQRLKNFWAKQRQEIEEGTELRPNSLPLCRIKKIMKVDEEVKMISAEAPVVFRKACELFIMELSMRAWDITEKNKKKTLQKSDIASAITKTDVFDFLVDIVPRHDTMEPGEISGWYLVRVFFVWMVLT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7832g00003 285 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 182 245 IPR003958 -
Mupr7832g00003 285 FunFam Nuclear transcription factor Y subunit gamma 151 260 - -
Mupr7832g00003 285 Gene3D Histone, subunit A 152 260 IPR009072 GO:0046982
Mupr7832g00003 285 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 144 262 - -
Mupr7832g00003 285 SUPERFAMILY Histone-fold 158 254 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7832g00003 Mupr-Chr7832 20312 22201 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7832g00003 161 267 CCAAT-HAP5 Transcription Factor Family AT1G56170 65.421 3.06e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mupr7832g00003 CBFD_NFYB_HMF 6.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7832g00003 K08066 - gmx:100808341 197.593