Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7817g00003 ATGGAAGAAACAACATCAACCATCATGACTGCACTCACCACCCTCTCTCCTTCCCAGTTCTCAGATCTCACCCACTCCATTCTCACCGCCACACACCACCACCATCGCCGCCTCTCCTCTCTCCTCTCCTCCCCCACGCTCTTCTCACTAACCCTCCACCGCCTCCACTCTCTCTCCCTCCCACAAAAGACCCTCCTCGTCGCCCGCCACCTCCTCTCCTCCCTCCACCTCCTCACCGCCACATCGCCGCCTCCCTCCACCGCCACCAGGCAGCGCGACCTCGACGCCGCCCTCCTCCTCCTCCTCCTCTGCCAAACACACAATCACAACCCCGAAGCCCTCGAGACACCCTTTTCCGAATGGAGAAAAAACCTCATCAACCTCTTCCGTGATTCATTCTTGACGCTCTCCTTTGCACCCCTTGGCGCGTGCGCGGGGACGGTTTTGATTCCCTTCGTCGAGAATGTGGCGCGGTGCTGGAGACTCGTCTGCGCGCTGGACTGCGGCGGCGGGAAGGAGGTGGGGGAGGTGGCGGCGTCGGCGGCGATGGTGGTGGCGCTGCCGTCGGTGGAGGTGAGCGTCGGCGGGAGAGAGTGCGTGATATGCAAAGAGGAGATGAGAATAGGGAGGGACGTGTGCGAGTTGCCATGTCAGCACTTGTTTCATTGGATGTGTATTTTGCCGTGGCTGGGGAAGAGGAACACGTGTCCTTGCTGCAGGTTTCGATTAGCCTCCGATGATGTCTTCGGAGAGATCCAACGGCTGTGGGAACTCTTGGTTAAAATGGACAGGGACTCCTGTGGTATAGGGTTTAGGGTGGGTTTAGGATGTCGGTATATTAGGGATCAATTGACAACGTGA 861 0.5865 MEETTSTIMTALTTLSPSQFSDLTHSILTATHHHHRRLSSLLSSPTLFSLTLHRLHSLSLPQKTLLVARHLLSSLHLLTATSPPPSTATRQRDLDAALLLLLLCQTHNHNPEALETPFSEWRKNLINLFRDSFLTLSFAPLGACAGTVLIPFVENVARCWRLVCALDCGGGKEVGEVAASAAMVVALPSVEVSVGGRECVICKEEMRIGRDVCELPCQHLFHWMCILPWLGKRNTCPCCRFRLASDDVFGEIQRLWELLVKMDRDSCGIGFRVGLGCRYIRDQLTT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7817g00003 286 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 129 243 - -
Mupr7817g00003 286 CDD RING-H2_PA-TM-RING 198 240 - -
Mupr7817g00003 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 245 IPR013083 -
Mupr7817g00003 286 SUPERFAMILY RING/U-box 195 245 - -
Mupr7817g00003 286 ProSiteProfiles Zinc finger RING-type profile. 199 240 IPR001841 -
Mupr7817g00003 286 Pfam Ring finger domain 198 240 IPR001841 -
Mupr7817g00003 286 SMART ring_2 199 239 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7817g00003 2 261 C3H Transcription Factor Family AT5G02750 49.818 6.67e-78 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7817g00003 K11982 - gmx:100810879 350.132