Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7816g00001 ATGGACCATCAACCTCCACCGCGCCCCGAAGACGACCCAACAGCCGCCGCAACTGACACCCCAAGGGGTGGCACGCGCCACCCCGTCTACCGCGGCGTCCGCAAGCGCCGCTGGGGCAAATGGGTCTCCGAAATTCGGGAGCCACGGAAGAAGTCGCGCATATGGTTGGGGTCCTTTTCGGCGCCGGAGATGGCGGCGCGAGCATACGACGTCGCAGCCTACTGCCTCAAAGGCCGGAAGGCGCAACTCAACTTTCCCGACGAGGTCGAATCCCTTCCGCTTCCGTCCACCCGCACGGCCAGAGACATTCAGGCCGCGGCGGCCAAGGCGGCGCGTATGATGAAAGCTTCGGCTGACGATGACAAAAGTGGCATTGCTTCCGACGGAGACAGCGGCGGCGACGATTTTTGGGGCCAGATTGAGTTGCCGGAGCTCATGGACGGCGAGTGTTGCTGGAGTTGCCCCGGAGGATCCTCCTGGACTTCCTCCGGCGACATCGCGGCGTGGCCGGAGGTGGAGCTTTTGCCGCAGCAACCGTCTTTCATGGCGTGTCTATAA 558 0.6362 MDHQPPPRPEDDPTAAATDTPRGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFSAPEMAARAYDVAAYCLKGRKAQLNFPDEVESLPLPSTRTARDIQAAAAKAARMMKASADDDKSGIASDGDSGGDDFWGQIELPELMDGECCWSCPGGSSWTSSGDIAAWPEVELLPQQPSFMACL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7816g00001 185 SUPERFAMILY DNA-binding domain 29 88 IPR016177 GO:0003677
Mupr7816g00001 185 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Mupr7816g00001 185 FunFam Ethylene-responsive transcription factor 2 28 88 - -
Mupr7816g00001 185 PRINTS Ethylene responsive element binding protein signature 68 88 IPR001471 GO:0003700|GO:0006355
Mupr7816g00001 185 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Mupr7816g00001 185 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 122 - -
Mupr7816g00001 185 MobiDBLite consensus disorder prediction 1 29 - -
Mupr7816g00001 185 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Mupr7816g00001 185 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Mupr7816g00001 185 CDD AP2 30 87 IPR001471 GO:0003700|GO:0006355
Mupr7816g00001 185 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7816g00001 Mupr-Chr7816 1196 1753 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7816g00001 1 185 AP2-EREBP Transcription Factor Family AT1G01250 53.960 1.84e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr7816g00001 AP2 6.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7816g00001 K09286 - gmx:100819971 296.204