Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7814g00002 ATGGCAACCTCTCAGCTCAGTGCATCATTGAGGAACTTGCCCGCATTTGAAAGGTTTCAGCCTTCCGCGCTTCGATTTCCTTCTGTTAGGAATGTCAGAATTGCCACTCTCACACAAACCTCGTTCCCCTCACTTGTTGTCAAAGCCACCGCCACTGTTCTCGCCCCCAAGCACACCTCTGTTAAGCCTTTGGGTGATAGAGTACTGGTGAAAATTAAGGATGCTGAAGAGAAGACTGAAGGTGGGATTTTACTGCCAGCAACTGCTCAAAGCAAGCCTCAAGGGGGTGAAGTGGTTACTGTTGGAGAAGGGAAGTCAGCTGGGAAGAGCAAAGTGGATATTAGTGTCAAGGTGACAGGTGCGCAAGTTGTGTATTCAAAATATGCCGGGACTGAGGTGGAGTTCAATGGTTCAAAACACCTTATATTGAAGGACGATGACTTAATTGGCATCCTTGAAACTGATGAGGTCAAGGATCTTAAACCCTTGAACGATAGAGTCTTGATAAAGGTTGCAGAAGCCGAGGAAAAAACTGCTGGAGGTTTGTTGCTCACAGAGTCAACCAAGGAGAAACCATCTATTGGAACAGTGATAGCAGTTGGTCCGGGGGCTCTGGATGAGGAAGGTAACAGAAAAGCATTGTCCATAACACCTGGGAATACAGTTCTTTATTCCAAATATGCGGGGAATGACTTCAAGGGCAAAGATGGTTCTGCCTATATTGCGCTGAGAGCCTCTGATGTCATGGCTATCCTGTCCTAG 762 0.4685 MATSQLSASLRNLPAFERFQPSALRFPSVRNVRIATLTQTSFPSLVVKATATVLAPKHTSVKPLGDRVLVKIKDAEEKTEGGILLPATAQSKPQGGEVVTVGEGKSAGKSKVDISVKVTGAQVVYSKYAGTEVEFNGSKHLILKDDDLIGILETDEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTESTKEKPSIGTVIAVGPGALDEEGNRKALSITPGNTVLYSKYAGNDFKGKDGSAYIALRASDVMAILS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7814g00002 253 ProSitePatterns Chaperonins cpn10 signature. 160 184 IPR018369 GO:0005524|GO:0006457
Mupr7814g00002 253 PIRSF Cpn21 1 253 IPR017416 GO:0006457|GO:0046914|GO:1901671
Mupr7814g00002 253 CDD cpn10 160 252 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 SUPERFAMILY GroES-like 59 153 IPR011032 -
Mupr7814g00002 253 PRINTS 10kDa chaperonin signature 182 203 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 PRINTS 10kDa chaperonin signature 217 229 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 PRINTS 10kDa chaperonin signature 239 252 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 PRINTS 10kDa chaperonin signature 160 175 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 SMART Cpn10_2 60 152 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 SMART Cpn10_2 159 252 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 PANTHER 10 KDA HEAT SHOCK PROTEIN 58 151 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 Hamap Co-chaperonin GroES [groES]. 60 153 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 Gene3D GroES chaperonin 156 253 IPR037124 GO:0006457
Mupr7814g00002 253 Gene3D GroES chaperonin 54 155 IPR037124 GO:0006457
Mupr7814g00002 253 Coils Coil 251 253 - -
Mupr7814g00002 253 Pfam Chaperonin 10 Kd subunit 61 151 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 Pfam Chaperonin 10 Kd subunit 160 251 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 Hamap Co-chaperonin GroES [groES]. 159 253 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 FunFam 20 kDa chaperonin, chloroplastic 54 154 - -
Mupr7814g00002 253 FunFam 10 kDa chaperonin 157 253 - -
Mupr7814g00002 253 CDD cpn10 60 152 IPR020818 GO:0005524|GO:0006457|GO:0044183
Mupr7814g00002 253 ProSitePatterns Chaperonins cpn10 signature. 61 85 IPR018369 GO:0005524|GO:0006457
Mupr7814g00002 253 SUPERFAMILY GroES-like 159 252 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7814g00002 Mupr-Chr7814 39469 41072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7814g00002 1 253 Calmodulin-binding Proteins AT5G20720 71.318 2.11e-125 354