Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7813g00004 ATGGGTCGTATGCACAGTCGCGGTAAGGGTATATCCTCTTCTGCTTTGCCCTACAAGAGGACACCTCCTAGTTGGCTCAAGATCTCTTCGCAAGATGTTGAAGAAAACATCTGCAAGTTTGCGAAGAAGGGTTTGACCCCATCTCAGATTGGTGTCATTCTTCGAGATTCTCACGGTATTGCTCAGGTCAAGAGCGTCACTGGCAGCAAAATTCTTCGCATCCTTAAGGCTCATGCTCTTGCGCCTGAAATTCCGGAGGATTTGTACCATTTGATTAAGAAGGCGGTTTCAATCAGGAAGCATCTGGAGAGGAACAGGAAGGACAAGGACTCCAAGTTCAGGTTGATTCTTGTGGAGAGCAGAATCCACCGACTTGCTCGCTACTACAAGAAGACTAAGAAGCTTCCACCAGTCTGGAAGTACTGTTGGAGGTTGTCATTTGAAGAGATGGCTGACTGCGGTGTTTTG 468 0.4744 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHALAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYCWRLSFEEMADCGVL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7813g00004 156 CDD Ribosomal_S15p_S13e 70 141 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mupr7813g00004 156 PANTHER RIBOSOMAL PROTEIN S15P/S13E 1 142 IPR023029 -
Mupr7813g00004 156 ProSitePatterns Ribosomal protein S15 signature. 98 128 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mupr7813g00004 156 SMART Ribosomal_S15_2 70 148 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mupr7813g00004 156 FunFam 40S ribosomal protein S13 35 82 - -
Mupr7813g00004 156 SUPERFAMILY S15/NS1 RNA-binding domain 66 141 IPR009068 -
Mupr7813g00004 156 Gene3D - 83 144 - -
Mupr7813g00004 156 SMART Ribosomal_S13_N_2 1 60 IPR012606 GO:0003735|GO:0005840|GO:0006412
Mupr7813g00004 156 Pfam Ribosomal S13/S15 N-terminal domain 1 60 IPR012606 GO:0003735|GO:0005840|GO:0006412
Mupr7813g00004 156 Gene3D - 35 82 - -
Mupr7813g00004 156 FunFam 40S ribosomal protein S13 83 146 - -
Mupr7813g00004 156 Hamap 30S ribosomal protein S15 [rpsO]. 3 149 IPR023029 -
Mupr7813g00004 156 Pfam Ribosomal protein S15 75 142 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7813g00004 Mupr-Chr7813 19658 21441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7813g00004 1 141 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 92.908 8.27e-95 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7813g00004 K02953 - zju:107414706 282.722