Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7807g00001 ATGGCAAAGAAGAAATCTCCCTCGCCGGCGCTCCACCCTCCTTACTTGGAGATGATCGCAGATGCAATATCGTCGTTGAAAGAGCGCACGGGTTCGAGCCAGCCAGCAATAGCCAAGTTCATGGAGGACAAGCACAGCAAAGCACTCCCTCCCAACTTCAGGAAACTTCTCTCCGTACAGTTAAAGAAATTGGTCCAATCAGAGAAGCTCTTCAAGGTCAAGAACTCCTACAAGCTTTCTTCCTCCAAGGAAACCGCGCCTAAAGAGAAGACCAAGAGGCTGAGTCAGATTAAAACACCCCAAGCTCTCAAAAAGAAAGCTCCCAACAAGAAGAAATTTGTATCTGTGGTGGTTGCGGCCTCCGAAGGAAGGAAAGTGAAGCGCTTGAGTCAGGTCAAGACCCCTGAGGCCTTGAAGATGAAGAAGCCCAATTTGACCCCCTTCTGTTGCTGCCTGCAGTGGACTTTTGTATATTGTTGTGGTCAACTTATTACTGTTGACGACGTTTCACATATTATTTAA 522 0.4751 MAKKKSPSPALHPPYLEMIADAISSLKERTGSSQPAIAKFMEDKHSKALPPNFRKLLSVQLKKLVQSEKLFKVKNSYKLSSSKETAPKEKTKRLSQIKTPQALKKKAPNKKKFVSVVVAASEGRKVKRLSQVKTPEALKMKKPNLTPFCCCLQWTFVYCCGQLITVDDVSHII 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7807g00001 173 Pfam linker histone H1 and H5 family 12 79 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr7807g00001 173 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 11 81 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr7807g00001 173 SMART h15plus2 9 76 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr7807g00001 173 Gene3D - 7 142 IPR036388 -
Mupr7807g00001 173 MobiDBLite consensus disorder prediction 81 105 - -
Mupr7807g00001 173 CDD H15 9 92 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr7807g00001 173 PANTHER HISTONE H1 4 124 - -
Mupr7807g00001 173 SUPERFAMILY "Winged helix" DNA-binding domain 9 92 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7807g00001 Mupr-Chr7807 5318 6599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7807g00001 13 96 Single Myb Histone (SMH) Gene Family AT1G72740 37.079 6.63e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7807g00001 K11275 - gmx:100306187 189.504