Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7801g00001 ATGAACCACGACGACAAACTCACCATGGACCTGGTTCCACCGTCTGAGCACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTCCTCGCGGTTGGTATCCCATGCAAGAGGCTGTTAGACACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCCTTTCTCAGCACCAGACCCCCAACTTCTCAAAACCAAAGCATTGATCACACCCTCAGTCTCCAGGGATTTTACAGTAATGCCAAAAAGGGACAAGCATCATCTTCATCTTCCTCGCCAACAACATCAAACGAGTCAGTGTCCCCAAAAGCAGCATCATTTGTTGTGAAACCACCTGAGAAAAAGCACCGTCTCCCTTCTGCTTACAACCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCCAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCCAAAAATTGGGCTAGGTTCATTCCAAACTCGCCAACCAGTTCAGTTTCTGCCAGTAAAGTTAATGTAAGAATTCGGCGATTGATGGAAGTGTGGCATGATGGTTTGGAGAGAAATGGAGCA 570 0.4842 MNHDDKLTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPTSQNQSIDHTLSLQGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPTSSVSASKVNVRIRRLMEVWHDGLERNGA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7801g00001 190 CDD HMG-box_SF 117 153 - -
Mupr7801g00001 190 FunFam Protein CRABS CLAW 89 160 - -
Mupr7801g00001 190 Gene3D High mobility group box domain 91 182 IPR036910 -
Mupr7801g00001 190 Pfam YABBY protein 14 156 IPR006780 GO:0007275
Mupr7801g00001 190 MobiDBLite consensus disorder prediction 83 103 - -
Mupr7801g00001 190 SUPERFAMILY HMG-box 100 154 IPR036910 -
Mupr7801g00001 190 MobiDBLite consensus disorder prediction 83 112 - -
Mupr7801g00001 190 PANTHER PROTEIN YABBY 6-RELATED 14 163 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7801g00001 Mupr-Chr7801 20392 22377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7801g00001 1 168 C2C2-YABBY Transcription Factor Family AT1G69180 63.953 1.32e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mupr7801g00001 YABBY 1.9e-56 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7801g00001 K25796 - gmx:100819079 336.265