Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7798g00001 ATGACTCCTCCTTCCTCCTTTGTAGTTTTCCCACTCTCACTCCCATTTCACTCCACTCCATACCACTCCCAACCAAACAAACAACTCATCTTCTCACACACACTCTTCTCTCTCTCTCTAGCTAGGGTTAGGGTTAGGTTTGTTCCGATCATGGCTTCGTCTTCCTCCGATCCGGGAAAGTCCGCGGAGACTTCGGAAGCGGCGGCGGCGACGGCAACGGCGACGACCGACCAGCTCTTGCTGTACAGAGGATTGAAGAAGGCGAAGAAGGAGAGAGGATGCACCGCCAAAGAGCGCATCAGCAAAATGCCTCCGTGCGCTGCCGGCAAACGGAGCTCCATATACCGCGGCGTCACGAGGTGGACTGGTCGTTATGAAGCTCATCTTTGGGATAAGAGTACGTGGAACCAAAATCAGAATAAGAAGGGAAAGCAAGGGGCGTATGATGATGAGGAAGCAGCAGCTAGAGCATATGACCTTGCTGCTCTCAAATATTGGGGTCCTGGGACTCTCATTAACTTTCCAGTGACTGATTATACAAGAGATCTTGAAGAAATGCAGAATGTGTCCAGAGAAGAGTATCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGACTATCAAAATATCGTGGACTCTCCAGTCGATGGGATCCATCATATAGTCGTATGGCTGGATCTGATTACTTCAATAGCATACATTACGGTGCAGGGGATGATTCAGCAGCAGAAAGTGAATATGTAAGTGGGTTCTGCATAGAAAGAAAGATTGATTTAACAAGTCACATCAAATGGTGGGGATCTAATAAGACTCGACATTCTGATGCTGGAACAAGATTATCAGAAGAAAAGAAACTTGGCTCTGCTGGAGATATTTGCAGTGAACTTAAGCAATTGGAACAGAAAGTCCAACCAACAGAACCTTACCAGATGCCACAGTTAGGCAGGCCACACAATGAGAAAAAGCATAGAAGTTCCTCAGTTTCTGCCTTAAGTATCTTGTCACAATCTGCTGCTTACAAGAGCCTACAAGAGAAAGCGTCAAAGAGACAGGAAAATAGCATTGATAATGATGAGAACGAAAACAAAAATACAGTCAACAAGTTGGATCATGGCAAGGCAGTTGAGAAACCATCAAATAATGATGGAGGCAATGATGGGGTCGACATTGCAATGGGAATGAGTGAGGCAATGTCTCTTCAAAGAAATGTTTACCCATTGACACCATTCTTATCTGCACCACTTTTGACAGCCTACAATACTGTCGATCCATTGGTAGATCCTGTCCTCTGGACATCTCTTGTTCCCATGCTTCCTGCTGGCCTTTCTCGTACAGCTGAGGTTGGTTACAAAGACCGAGACCAGTTCAACATACACTATGTTTCAGCCAGAGGAATGATTGGACATTTGAATTTCCAATTGAAGAAAGGCAAGCATCTGAAAGCTGAGCTTGTATCAAACAAACAACAGCATAAAGGTCTGAAGCGCTCAAGC 1500 0.4547 MTPPSSFVVFPLSLPFHSTPYHSQPNKQLIFSHTLFSLSLARVRVRFVPIMASSSSDPGKSAETSEAAAATATATTDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWDPSYSRMAGSDYFNSIHYGAGDDSAAESEYVSGFCIERKIDLTSHIKWWGSNKTRHSDAGTRLSEEKKLGSAGDICSELKQLEQKVQPTEPYQMPQLGRPHNEKKHRSSSVSALSILSQSAAYKSLQEKASKRQENSIDNDENENKNTVNKLDHGKAVEKPSNNDGGNDGVDIAMGMSEAMSLQRNVYPLTPFLSAPLLTAYNTVDPLVDPVLWTSLVPMLPAGLSRTAEVGYKDRDQFNIHYVSARGMIGHLNFQLKKGKHLKAELVSNKQQHKGLKRSS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7798g00001 500 ProSiteProfiles AP2/ERF domain profile. 114 175 IPR001471 GO:0003700|GO:0006355
Mupr7798g00001 500 Gene3D AP2/ERF domain 114 177 IPR036955 GO:0003700|GO:0006355
Mupr7798g00001 500 MobiDBLite consensus disorder prediction 344 389 - -
Mupr7798g00001 500 MobiDBLite consensus disorder prediction 347 379 - -
Mupr7798g00001 500 SMART rav1_2 114 181 IPR001471 GO:0003700|GO:0006355
Mupr7798g00001 500 Coils Coil 350 370 - -
Mupr7798g00001 500 SUPERFAMILY DNA-binding domain 113 176 IPR016177 GO:0003677
Mupr7798g00001 500 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 69 350 - -
Mupr7798g00001 500 MobiDBLite consensus disorder prediction 304 330 - -
Mupr7798g00001 500 Pfam AP2 domain 115 167 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7798g00001 Mupr-Chr7798 2529 6513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7798g00001 73 476 AP2-EREBP Transcription Factor Family AT2G41710 62.500 1.36e-161 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr7798g00001 AP2 1.9e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7798g00001 K09285 - gmx:100786651 706.057